Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01427 ATGCATGACAATGATCCTTTCACCAAAGCTCTTTCATTAGCAGGTGCTCAAGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGAGATCATAGCAAAGGCAGAGACTTCGCTGGGGATGTGTGCATCTGAAATTGCGTCCAAGCTTCCAAACCAACACTCTGATATGGCCAACAGGCTTGAACGCATGCTGCCATTGTTGGCGGTACATTCTCTTCTCACTTGCTCCATTCGCACCAATCAAGATGGTGACACAGAGAAGGTTTATGCTCTCTCCCCTGTTGGACAATACTTTACACGTAATGATCAACAAGGAAGTTCCTTGGCTGCATTGTCAACTTTAATCTATCAAGGATACCGTAATGTTTGGAAAGATACAAAAGATGCAATATTAGACGCTAACAATCACAACCATTTCCAAAAAGTGTATGGAAAGTTAGCATTTGAATATATGGAGACAGATAGAGAGTTCGGTAACCTTTTCGGGCAAGCAATGTCTCAAGCTGGACCTCTGGTAATGAAATCAATCCTTGATTCATATAAAGGCTTTGAGGGAATATCAACGTTAGTTGATGTCGGAGGTGGATATGGACAAGCCCTGAAACAAATTCTCTTTCACTATCCATCAATTAAAGGAATTAATTTTGATTTACCTCACGTTGTGGAAAACGCACCTCCAGAGAGAACTATTTTGCATAAAGGGTTAGAGCATATCGGAGGAGACATGTTTACAAGTGTTCCAAAAGGCGATGCCATTTTGCTCAAGCATGTATGTCATAATTGGGGAGATGAAGAATGTGTGATGTTTTTAAGAAACTGCTACGAAGCTTTGCCAGCACATGGGAAGGTCATAGTTTTGGATACTTTATTGCCTGAAATTCCGAAATCAACATCATCGTCTAAGGATACTTATGCTGTGAATCTGGATTGTCTTATGCTTCTAGTTCATGGTAAAGGAAAGAACTGA 978 0.4059 MHDNDPFTKALSLAGAQVFPAILNAAVDMNLFEIIAKAETSLGMCASEIASKLPNQHSDMANRLERMLPLLAVHSLLTCSIRTNQDGDTEKVYALSPVGQYFTRNDQQGSSLAALSTLIYQGYRNVWKDTKDAILDANNHNHFQKVYGKLAFEYMETDREFGNLFGQAMSQAGPLVMKSILDSYKGFEGISTLVDVGGGYGQALKQILFHYPSIKGINFDLPHVVENAPPERTILHKGLEHIGGDMFTSVPKGDAILLKHVCHNWGDEECVMFLRNCYEALPAHGKVIVLDTLLPEIPKSTSSSKDTYAVNLDCLMLLVHGKGKN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01427 325 PIRSF O-mtase 2 325 IPR016461 GO:0008168
Aip05g01427 325 Pfam Dimerisation domain 22 72 IPR012967 GO:0046983
Aip05g01427 325 Gene3D - 18 180 IPR036388 -
Aip05g01427 325 PANTHER O-METHYLTRANSFERASE 8 322 IPR016461 GO:0008168
Aip05g01427 325 Gene3D Vaccinia Virus protein VP39 162 323 IPR029063 -
Aip05g01427 325 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 325 IPR016461 GO:0008168
Aip05g01427 325 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 322 IPR029063 -
Aip05g01427 325 Pfam O-methyltransferase domain 127 322 IPR001077 GO:0008171
Aip05g01427 325 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 322 - -
Aip05g01427 325 SUPERFAMILY "Winged helix" DNA-binding domain 5 106 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01427 Aip-Chr5 21979934 21992610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01427 3 324 Monolignol Biosynthesis Gene Families AT5G54160 48.148 2.07e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01427 K13066 - aprc:113869089 383.645