Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01414 ATGGGAGAATTCAGAGTGAGTGTGATCAAAGAGGAAGTGGTGGCAGCCATGCTTCCCATGCAAGACCATTGGTTGCCATTCTCAAACCTTGACCTCCTTCTTCCACCGATTGATGCTAGCGTCTTCTTTTGCTACAATAACACCGCAATGCTGAGCTTTGGATCAATGGTGGAGTCACTTAAGAATTCACTAGCTAAGGCTTTGGTTCCCTATTATGCTTTTGGTGGTGAGGTGGTGCAAAACTCCATGGGTGAACCTGAGCTTCTTTGCAATAACCGTGGGGTTGATTTTGTTGTGGCTGAGGCTGATGTTGAACTTCAGAGTCTTAACTTGTATAACCCTGATGAATCTGTTGAAGGAAAGCTTGTTCCAAAGAAGAAGCGTGGCGTGCTTGCTGTTCAGGTAACTTGGCTAAAGTGTGGTGGATTAGTAGTAGGATGCACTTCTGACCATCGAATCGCAGATGCTTACAGTACAAACATATTTCTTGTATCGTGGGCCCAGTTGGCCCAATCGACAGGGCTCACTACCTTAACTCATCAACCTTGTTTTCGCCGCTCCCTCCTCAGTCCAAGACGCCCCCCAACTATCCACCCTTCAGCTTCAATTGACCGCATGTATGTTCTCCTCACCGACCACCTTCCTCCACCAGCTGAGCCCAATCCCAGTTCCGATCCCGGCCCAATCATCAGCCGCATATATTTCATCACTGTTGAAGAACTTAACCGCATTCAGGCACTTGCAACCTCAAACGGTGCCAAGCCCACAAAGCTTGTATCCTTCTCTGCATTCTTGTGGAAATTGGTTGCTACGGCTTCTGTTTCATCCAAAGCTATTATTGATGGTTATAATAACAAAAAGGCGATCGTTGCTAAGATGGGTGTTGTGGTTGATGGAAGAAGAAGGCTGAGCAATGGCGACAAGAAGAAGGAAGCACTAATGAATTGTTACTTTGGCAACGTGGTTTCCATTCCATTTGATGGGGAACCAGTGGAGAAGTTAGTGGAAAAGACACTGAGCCAGGTGGCCGAGCAGGTTCACGAGTTCCTAGAGGTGGCAACAACGGAAGAACACTTCTTAGGGCTCAATGACTGGGTTGAAATACACCGCCCCGTACCGGCGGTGACCAGGATCTTTCATGAAACGTATGATGGGCCGTGTTTTGTGGTGTCTTCGGGAAGAAGGTTTCTTGAGTCAAAGGTTGATTTTGGCTGGGGAAAGCCAATATTTGAATCATGCCATTTTCCATGGGGTGGTCGTTGTGGTTATGTGATGCCATTGCCTAGCCCTAAAGGGAATGGCGATTGGGTGCTCTATATGCACCTTCACAAGAACCACTTGGAATTCATGGAGTCTCATTATTCTCATATATTTAGGCCTTTATCTTGGGATTACCTTTCCAACCAAATATGA 1413 0.4671 MGEFRVSVIKEEVVAAMLPMQDHWLPFSNLDLLLPPIDASVFFCYNNTAMLSFGSMVESLKNSLAKALVPYYAFGGEVVQNSMGEPELLCNNRGVDFVVAEADVELQSLNLYNPDESVEGKLVPKKKRGVLAVQVTWLKCGGLVVGCTSDHRIADAYSTNIFLVSWAQLAQSTGLTTLTHQPCFRRSLLSPRRPPTIHPSASIDRMYVLLTDHLPPPAEPNPSSDPGPIISRIYFITVEELNRIQALATSNGAKPTKLVSFSAFLWKLVATASVSSKAIIDGYNNKKAIVAKMGVVVDGRRRLSNGDKKKEALMNCYFGNVVSIPFDGEPVEKLVEKTLSQVAEQVHEFLEVATTEEHFLGLNDWVEIHRPVPAVTRIFHETYDGPCFVVSSGRRFLESKVDFGWGKPIFESCHFPWGGRCGYVMPLPSPKGNGDWVLYMHLHKNHLEFMESHYSHIFRPLSWDYLSNQI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01414 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 462 - -
Aip05g01414 470 Pfam Transferase family 5 456 - -
Aip05g01414 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 462 - -
Aip05g01414 470 Gene3D - 3 202 IPR023213 -
Aip05g01414 470 Gene3D - 215 455 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01414 Aip-Chr5 21558649 21561978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01414 15 451 Monolignol Biosynthesis Gene Families AT5G48930 27.902 4.26e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01414 - - ahf:112746934 949.888