Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01389 ATGCGGCGCACCGGTCTCCCCGCCCATGACCTCCGTATCCTCGACCCCCTCCTATCCTACCCCTCGACCGTACTGGGCCGTGAGAGGGCCATCGTGATCAACCTCGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCCCGCGACCCCTCCGTGACCCCTTTCGTGGAGGAGCTCCACTCGAGGATCCTCCGGCACCACCAAGCCCAGGGAGCTGCTGTGGCCGCTGCGGCTTCGGATGATTCCAAGCTGAGCAAAGTGTATGACACGGAAGAAGGGCAATCAAGAGAGGGACAGGATGAAGATGAAGATCCCGATCCCGTTGGGGAGGAAGTGAAATCCCAATCGAAGCAGAATGATATCCAGAATGGCGATGGCATGAAGATCCTGCCATTCGAGTTTGTGGCACTGGAGGCCTGCCTGGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACCTTGGAACAAGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGTGTTCACCAAATTAAGAGCCGCCTTGTTGCCATCACTGGTCGCGTTCAGAAGCTCCACAGTTCTTCTGCCTCCTCTATAAATGATGATGATGTAGACAATGACCACCATAATCAGCTTGATGTTGATGACAGCTGCATTCCTCCTGAAATATCACTGGAAGAGGGTGGAGCTGCTGCAAGCGATGACTATAATCAACATGATGATGACAGGTTATTAGTGGGAGTTAGCAGGGACAGCCGCGCTAGCACTACCTATAGTACCACAACTAAGCATCTTGACGTGGAGGAGCTTGAGATGCTCTTGGAAGCATATTTTGTGCAAATCGATGGCACACTCAACAAGCTCTCTACGCTAAGGGAATACGTGGACGACACAGAGGACTACATCAACATAATGCTGGATGACAAACAGAATCATTTGCTCCAAATGGGAGTCATGTTGACCACATCAACTCTGGTAGTGAGTGCCTTTGTCGTTGTCGCTGGTATTTTTGGCATGAATATTCATATTGAACTATTTGATTCAAATGTTGCCGGGAATCGAGAGTTCTTCTGGACTGTTGGGGGCAACACTGCCGGAACCATTTTCTTGTATGTGGTTGCCATTTCCTGGTGCAAGTACAAACGCTTGCTCGAGTAG 1185 0.5122 MRRTGLPAHDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEELHSRILRHHQAQGAAVAAAASDDSKLSKVYDTEEGQSREGQDEDEDPDPVGEEVKSQSKQNDIQNGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVHQIKSRLVAITGRVQKLHSSSASSINDDDVDNDHHNQLDVDDSCIPPEISLEEGGAAASDDYNQHDDDRLLVGVSRDSRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTSTLVVSAFVVVAGIFGMNIHIELFDSNVAGNREFFWTVGGNTAGTIFLYVVAISWCKYKRLLE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01389 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 203 394 IPR039204 -
Aip05g01389 394 Gene3D Magnesium transport protein CorA, transmembrane region 113 322 - -
Aip05g01389 394 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 203 394 - -
Aip05g01389 394 CDD Mrs2_Mfm1p-like 1 392 IPR039204 -
Aip05g01389 394 Gene3D - 1 52 - -
Aip05g01389 394 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 1 214 - -
Aip05g01389 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 214 IPR039204 -
Aip05g01389 394 Coils Coil 143 163 - -
Aip05g01389 394 MobiDBLite consensus disorder prediction 88 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01389 Aip-Chr5 20779193 20780945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01389 1 394 MRS2 Gene Family AT3G19640 60.839 2.01e-159 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01389 - - adu:107488664 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01389 05 20779193 20780945 Aip05g01389 05 20779193 20780945 ECH