Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01388 ATGGAACCAGCAAAGGCAACCATAGCAGCTTGTCAATTCCACCAACACCACCGCTACCAGAACAGCAAGTGCATCAAGATGTTTTGGGGCTTGACGATTCTCCTCCTACTGACTCTATCCAATCAGTCAGCTGCATCAGATGCCAACATTGTCAAGAGCTTACCAGGCTTCCCCGGGGAGCTACCTTTCCTACTCGAAACAGGGTACATAGACGTAGGGGAAGTAGATGAGGTTGAGCTATTTTATTACTTCATAGAGTCAGAGGGGGAGCCAGAAGATAATCCACTCGTGCTTTGGCTCACAGGAGGCCCTGGTTGCTCAGCCCTCTACGGTCTCATGTATGAGATTGGTCCATTATCTTTCGATTACGGAAGGTCTAGTGGGGGAAAGAAACCAGTTTTAACTTTGAACGATTACTCATGGACTAAGGTTGCCAACATTATTTTCTTGGATGCGCCCGTTGGCACGGGATTTTCATATGCCAAAACTTCATCTGGATACAACACGAATGACACAAAGTCAGCTGCAGACATTTATATGTTTCTGAGAAAGTGGCTTGTGGCTCACCCTAGGTTTCGTGCAAATCCTCTCTACATTGCTGGTGATTCTTATAGCGGAATCACGGTTCCAGTCCTTGTTAAAGAAATCTCTGATGGTAACAAAGCTGGAACATTGCCACCCATCAATCTCAGAGGTTACATTCTAGGAAACCCATTAACTGATATCGGATATGATATAAACTCGAGAGTTAAGTTTTCCCACAGAGTTGGACTTCTATCTGATGAACTCTATCTGGCACTGGAGCTTTCTTGTAAAGGAGAGTATGTTCGCCCAAATAAAAGTGAAGGTGCATGCATCAGCAATCTTGAGATAATGGATCTGTGCTTGAAAGACATATTCGCTCCGATGATATTGGAGAGAAAGTGTAGCCCGTTCTCATCAGCGAAGCCGAACAACATTCTTAAGTGGGGTTCAACCACAACCCCATCTTCAGATACACTTCTTTTAGAACTTCGACGCTGCAGGGACTATGACTACTTGTTAGTAAACATCTGGGCTAATGATGGAGAAGTTCAAGAAGCTCTGCATGTTAGAAACGGAACTATAAAAACGTGGGAGATGTGTAGTAAAAACTTAGCTTATGTGAATGACATAACAAGTAGTGTTGAATATCACCTGAACTTTACCAGCGAAGACCTTAGAGCCATCATTTACAGCGGAGATCATGATCTGATTGTTCCATATGTGGGCACTGAGGAATGGATACAATCTCTGAATTTAACTGTTTCTTCCGATGATGTGTGGAGCCCATGGTTTCAGGATGGACAAGTTGCAGGCGAAGGAGGGAATCGAAGCGATGAATATTCGGGGTCAGGGTCAGGGTCCGCCTCCGATTCCGGCAGCGGCGGCAGGGATGATGGATGGGATTGGGGTTCCTGTTGCTCCGAATCCGATAAGCAGAAAGAAGGGGGACCGGGGTGA 1482 0.4548 MEPAKATIAACQFHQHHRYQNSKCIKMFWGLTILLLLTLSNQSAASDANIVKSLPGFPGELPFLLETGYIDVGEVDEVELFYYFIESEGEPEDNPLVLWLTGGPGCSALYGLMYEIGPLSFDYGRSSGGKKPVLTLNDYSWTKVANIIFLDAPVGTGFSYAKTSSGYNTNDTKSAADIYMFLRKWLVAHPRFRANPLYIAGDSYSGITVPVLVKEISDGNKAGTLPPINLRGYILGNPLTDIGYDINSRVKFSHRVGLLSDELYLALELSCKGEYVRPNKSEGACISNLEIMDLCLKDIFAPMILERKCSPFSSAKPNNILKWGSTTTPSSDTLLLELRRCRDYDYLLVNIWANDGEVQEALHVRNGTIKTWEMCSKNLAYVNDITSSVEYHLNFTSEDLRAIIYSGDHDLIVPYVGTEEWIQSLNLTVSSDDVWSPWFQDGQVAGEGGNRSDEYSGSGSGSASDSGSGGRDDGWDWGSCCSESDKQKEGGPG 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01388 493 Gene3D alpha/beta hydrolase 60 456 IPR029058 -
Aip05g01388 493 Pfam Serine carboxypeptidase 55 447 IPR001563 GO:0004185|GO:0006508
Aip05g01388 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Aip05g01388 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Aip05g01388 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Aip05g01388 493 MobiDBLite consensus disorder prediction 453 467 - -
Aip05g01388 493 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 26 448 - -
Aip05g01388 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 448 IPR001563 GO:0004185|GO:0006508
Aip05g01388 493 SUPERFAMILY alpha/beta-Hydrolases 51 447 IPR029058 -
Aip05g01388 493 MobiDBLite consensus disorder prediction 442 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01388 Aip-Chr5 20775165 20779127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01388 348 446 Calmodulin-binding Proteins AT2G22960 46.465 2.47e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01388 K16296 - jre:108983123 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01388 05 20775165 20779127 Aip05g01388 05 20775165 20779127 ECH