Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01375 ATGTCTCGCTCCCTCAACAGCAGAACTTTATTCTTGATTCTAATCTCAACTGTGCTGATGAAGCACGGTAATTCAATGCCAACATACAATTATCATGACTGTAAAGATCCATTATTGGAGAATGCAACCACCGGTGCCATTTTCCAATCTGATCTAACTTATCTTTTGAGGCTTTTATCTTCAGCAGCTTTCTCTAAGAGCTTCCACAAGGCTAATGTTTCCACAAGGCTGTATGGCCTCTTCCAATGCAGGGCTGATGTGTCCCAGGTCACCTGCAAAAACTGTACCATAACTGCCAGTATAGAAATCAAAAGCAAGTGCGCATCGAAATCTAGTGCAGTAATCTGGTACGACGAATGCATGCTTAGGTACTCCAAGGAACAGTTTTTTGGGGTGGCGCAAACTAAGCCATTAGTATTTGCTTGGAACATTGACGACAATAATAGCACTTCACCGACTGAAACTTATCTCAATGTACAAGCAGTGATGTACCAGTTGATAGAACAAGCCTCAAGTAGGGATATGCTGTTCAGTGTAGAGAAATATAAGGTAAATAATGGGTCCGAGGATAGATACGGGTTGGTGCAGTGTACAAGGGATATAAATCGCTCTTCATGTGCGTCTTGTTTGTCTAATTTGATGGATAGATCTAAGACTTGTTGCGAACACAGTGTTGGGTGGCGCTTACTGGCTCCTACTTGCATTATAAGGTACGAGAAGGATATCTTCTATGATAGTTTAGAGCCACTAGTATCACCTAATACTAGCAAACCGAGACTACCATCGAAAGATAACAGAAATCGCACTGCAAAACTCCTTATACTCCACATGGTCATTCCAATTACGGTTTTTATGCTCTTCTGTCTTGTCTGGTCAGCTCAACCCAAGGAAAGACGAAATCAAGGGGAACAGCTTACCGATGTAATTCAAGTAAATAAGTTGAAAGGTTCAAGTAGGTCGTACTTTAAGGATCAAGGAATGATTACACTCGAAGACAACAAAGGAGAAGTACAGTGCTTTAGTTTGAGCACGATTAAGGTTGCTACCAACAGTTTTTCTGATGACACTAAGCTAGGTGAAGGTGGCTTTGGGCCCGTTTTCAAGGGGAAGTTAAATAATGGAAAGGAAATAGCAGTTAAAAGGCTTTCATTCAAATCAAGACAAGGCATTGAAGAATTCAAGAATGAAGTGACGTTGATTGCAAAACTTCAACACAAAAATCTTGTTAGGCTCTTGGGATGCTGCCTTGATAGAAACGAAAAGCTTCTTGTCTACGAGTACATGGCCAACACCGGTCTCGATGCTTTTCTATTTGATCAAAACAAACGTGGAAAGCTGGACTGGCCTAAGCGGGAAAAAATTATAAATGGAATTGCAAGAGGTCTTTCATATCTACACGAGGATTCCAGGCTGAAAATTATTCATAGAGATTTGAAAGCTAGCAATGTATTGTTAGACCAAGACATGAATCCCAAGATATCAGATTTTGGGACTGCTAGAATATTTTATAGCGATCAAATTGAAGCAAGCACCGAAAGGGTTGTTGGTACATAG 1554 0.406 MSRSLNSRTLFLILISTVLMKHGNSMPTYNYHDCKDPLLENATTGAIFQSDLTYLLRLLSSAAFSKSFHKANVSTRLYGLFQCRADVSQVTCKNCTITASIEIKSKCASKSSAVIWYDECMLRYSKEQFFGVAQTKPLVFAWNIDDNNSTSPTETYLNVQAVMYQLIEQASSRDMLFSVEKYKVNNGSEDRYGLVQCTRDINRSSCASCLSNLMDRSKTCCEHSVGWRLLAPTCIIRYEKDIFYDSLEPLVSPNTSKPRLPSKDNRNRTAKLLILHMVIPITVFMLFCLVWSAQPKERRNQGEQLTDVIQVNKLKGSSRSYFKDQGMITLEDNKGEVQCFSLSTIKVATNSFSDDTKLGEGGFGPVFKGKLNNGKEIAVKRLSFKSRQGIEEFKNEVTLIAKLQHKNLVRLLGCCLDRNEKLLVYEYMANTGLDAFLFDQNKRGKLDWPKREKIINGIARGLSYLHEDSRLKIIHRDLKASNVLLDQDMNPKISDFGTARIFYSDQIEASTERVVGT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01375 517 Gene3D - 138 243 IPR038408 -
Aip05g01375 517 Gene3D - 28 129 IPR038408 -
Aip05g01375 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Aip05g01375 517 ProSiteProfiles Protein kinase domain profile. 352 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01375 517 Pfam Salt stress response/antifungal 40 126 IPR002902 -
Aip05g01375 517 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Aip05g01375 517 ProSiteProfiles Gnk2-homologous domain profile. 135 243 IPR002902 -
Aip05g01375 517 SUPERFAMILY Protein kinase-like (PK-like) 334 517 IPR011009 -
Aip05g01375 517 ProSiteProfiles Gnk2-homologous domain profile. 30 129 IPR002902 -
Aip05g01375 517 Gene3D Phosphorylase Kinase; domain 1 327 427 - -
Aip05g01375 517 SMART serkin_6 352 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01375 517 PANTHER PROTEIN KINASE DOMAIN 20 517 - -
Aip05g01375 517 Gene3D Transferase(Phosphotransferase) domain 1 428 517 - -
Aip05g01375 517 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 517 - -
Aip05g01375 517 Pfam Protein kinase domain 353 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01375 Aip-Chr5 20468555 20470798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01375 2 517 Receptor kinase-like Gene Family AT4G05200 42.831 3.41e-124 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip05g01375 Pkinase 3.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01375 - - adu:107488599 898.656