Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01373 ATGGCGTTGTGTTTTGTTGTGTTACTCCTATCACTAGCAGATAAACGGGTTTCAACTTGGGAAGAAGCAGAAAGATCAAAAAAGATTCGTTCTCCAATGATTCCGAAATACATTGAATTAGTGATTCTTGTTTGCTCTCTTTCTCTGGTTTCACAAGTTTGCTATGCCGACCCTCCTTATGAGATTTGCTCCAGCCATGAAAATGGGAGCACCTTCCAGAACAATCTAAACAACCTTCTCCAATCCCTACCCAAAGCTTGCCAGAACTGCATAGCCACCACAATAGAGGACATCCTCAAACTCTGTCCCCAATCACAAGAAGCTGTTCTTTGGGAGGAGAGCTGTCAGATACGTTATTCCAATACCAACTTCATCGGCACGCTGAATGACACAGGGAACATAGGCAAAGACAATGTTCAAAATGTGTCAGAACCACACAAATTTCAGTCTTCTGTGAACCAGATGCTGAGTAATCTTTCGTCCACTGCAGCTTTTAATGTTTCGGCAAACATGTATGCCACCGGAGAAGCTCCCTTTGGAGATGAAACAATATATGCCTTAGTGCAGTGCACAAGAGATTTATCAGCCAATGATTGCAGCAAGTGCCTCAAAAGTGCTATGAGAGACATACCAAGCTGTTGCTATGGCTCCATCGGTGCCAGAGTCCTGAGCCGCAGTTGTTACCTCAGATATGAATTTTATCCCTTCTATCTTGGTGCCACAGGGCCGTTAAGTCCTTCACCCCACACAAATCAAGGCAAAAATAGCAAAGTATGGATTATTACGGGAATTGCAGTTGCACTTGTCCTATGCTTGGCAATTATTTTCATTTATTGCATGTACTTTATACGGAACAAGAAAACACACAAGCGGGATGAAGCAGTGTTCCATCATCCAGATTTTCCACGATTAAATGGCGTAATATCCGAGGACTCCCCTTATATTGATTTTGGATCACTTTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAACTTGGACAAGGTGGCTTTGGTCCAGTTTACAAGGGGATTCTAAGCAATGAGCAGGAGGTAGCAATCAAGAGGCTCTCAACCTGTTCTGAGCAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTCATAATGAAGCTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGAGGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAACGGTAGCCTTGATGTACTCCTTTTCGATCCCAACGAACGTGCAAAGCTGGTTTGGACGAAACGCCTTGATATAATAGATGGATTAGCAAGGGGGATTCTTTATCTTCACGAAGACTCTCGACTTAAAATTATCCATAGAGACCTAAAAGCAAGCAATGTGTTGTTGGACTCAGACATGAATCCAAAGATCTCTGACTTTGGAATGGCAAAAATATTCGCAGGGAATGAAGGCGAAGCTAACACGGCTACAATAGTTGGCACATATGGATATATGGCACCGGAGTATGCTATGGAGGGACTATATTCCATAAAATCTGATGTTTTTGCATATGGAGTACTAGTTCTTGAGATCATTACAGGGAAGCATAACGCAGGCTTCTTCCACTCTAAAAGTACTCCTAGTCTTCTAACATATGCATGGCATCTATGGAATGAGGGGAAGGGACTAGAGTTAAAGGATCCCTTGTTAGGTGATTCATGCCAAGAAGATGAGTTCTTGAGATGCATGAATATTGGACTGCTGTGTGTTCAAGAAGATGCATATGATAGGCCAAGCATGTCTTCTGTTGTTCTAATGTTGAAGAATGAATCAGCAATAGTTGGCCAACCAGCGCGACCACCTTTCTCAGTAGGGAAATTCAATGACAATGATGGGCTTCACCCACACTCTAGACAATGCTCTATCACTTTCTTAACTGATTCTGACATATTATTGCCTCGTGACTGA 1941 0.4209 MALCFVVLLLSLADKRVSTWEEAERSKKIRSPMIPKYIELVILVCSLSLVSQVCYADPPYEICSSHENGSTFQNNLNNLLQSLPKACQNCIATTIEDILKLCPQSQEAVLWEESCQIRYSNTNFIGTLNDTGNIGKDNVQNVSEPHKFQSSVNQMLSNLSSTAAFNVSANMYATGEAPFGDETIYALVQCTRDLSANDCSKCLKSAMRDIPSCCYGSIGARVLSRSCYLRYEFYPFYLGATGPLSPSPHTNQGKNSKVWIITGIAVALVLCLAIIFIYCMYFIRNKKTHKRDEAVFHHPDFPRLNGVISEDSPYIDFGSLCVATKNFSDSNKLGQGGFGPVYKGILSNEQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDEEEKLLVYEYLPNGSLDVLLFDPNERAKLVWTKRLDIIDGLARGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMAKIFAGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFAYGVLVLEIITGKHNAGFFHSKSTPSLLTYAWHLWNEGKGLELKDPLLGDSCQEDEFLRCMNIGLLCVQEDAYDRPSMSSVVLMLKNESAIVGQPARPPFSVGKFNDNDGLHPHSRQCSITFLTDSDILLPRD 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01373 646 Gene3D - 83 124 IPR038408 -
Aip05g01373 646 Gene3D - 134 236 IPR038408 -
Aip05g01373 646 Gene3D Phosphorylase Kinase; domain 1 299 402 - -
Aip05g01373 646 Pfam Protein tyrosine and serine/threonine kinase 330 595 IPR001245 GO:0004672|GO:0006468
Aip05g01373 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Aip05g01373 646 Gene3D Transferase(Phosphotransferase) domain 1 403 607 - -
Aip05g01373 646 ProSiteProfiles Gnk2-homologous domain profile. 13 124 IPR002902 -
Aip05g01373 646 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01373 646 Pfam Salt stress response/antifungal 140 233 IPR002902 -
Aip05g01373 646 SMART serkin_6 327 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01373 646 CDD STKc_IRAK 333 600 - -
Aip05g01373 646 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 79 640 - -
Aip05g01373 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 79 640 - -
Aip05g01373 646 SUPERFAMILY Protein kinase-like (PK-like) 313 625 IPR011009 -
Aip05g01373 646 ProSiteProfiles Gnk2-homologous domain profile. 130 236 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01373 Aip-Chr5 20459742 20462962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01373 87 621 Receptor kinase-like Gene Family AT4G05200 45.208 1.19e-165 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip05g01373 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01373 - - ahf:112749922 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01373 05 20459742 20462962 Aip05g01373 05 20459742 20462962 ECH