Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip05g01367 | ATGTCTCTCTCTCACCCTAAGACTGAGGTTGGATACTTGGTTCCCCTGAATCATAATTTGGAGGAAAACCCTTCAGCTCCCAAGTTACCCATCTCCCATGGCACTAACCTCATTGGTCGCGCCAACATTCCTCTTCCTCTTCCCGACAAGAGGCTTAGCCGCAACCACATCACTTTAACTGCTTCTTCCGACGGATCTGCTCATCTGCTTGTGGAGGGCACGAATCCAGTCGTTGTTAACTCCAGGAACAAAAGAAGGAAGCTCAATTCTCAGGAGAATGCTGCCATTTCTGATGGTGATATACTTGAGCTTATTCCCGGACACCATCTTTTCAAATATGAAGTTTCGGGTGCCACCAAAACTGATAATACACCTTCAGCTGGCACTGGCACCACAAACAAGGAAGCTTCTCACAGCCTTTCGCAGGATGGGAACGGGACTTGCAGTCAGGAGCAAGGAAGAAATGCAGCGGCACGCAAGCCTGGTCATTCTCAATCCGGTGAACACAGTAATGCAGAGGCTATTCGCAATTTCCATATCCCTTCTGAAAAAATACCTTCCACTTTTCGACTTTTGCGTGTGCAGCAGCTACCACCTTGGGCAAATACTTCTTGTGTTGCAATAGATGATGTTATTCAGGGGGATATTCTAGTTGCCATCCTTTCCAACTACATGGTAGACCTTGACTGGTTGGTTCCGGCATGTCCTGCACTTTTGAAAGTCCCCCATGTGTTAGTTATTCATGGCGAGAGTGATGGGAGGGTTGATTATTTGAAGAGAAGTAAACCTGCCAACTGGATTCTGCACAAACCACCATTGCCAATTTCATTTGGGACACATCATTCAAAGGCCATGTTTCTTGTATATCCTCATGGGATAAGGGTGATTGTGCATACAGCGAACTTAATATATGTAGATTGGAATAATAAAACCCAAGGTTTGTGGATGCAAGATTTTCCATGGAAAGATCAAAACAGTCTAAGCAAGGGATCTGTATTTGAAAATGACCTGGTTGAATATCTCAGTATGCTGAAGTGGCCAGAATTCTCTGTTAAGCTTCCTTCCCTTGGAAACTTCAGTATATGTCCATCTTTCTTCAAGAAGTTTGATTATAGTGATGCAATGGTTAGGTTAATTGCATCTGTACCTGGATATCATTCTGGTGCTGGCATTAAAAAGTGGGGACATATGAAACTGCGTTCTTTGCTCCAAGAGTGTACTTTTGACGATGATTTTAAAAGATCTCCACTCATTTATCAGTTCTCCTCCCTTGGCTCTCTTGATGAGAAATGGATGGCTGAGTTGACATCATCAATGTCTGCTGGTTTATCAGAAGATAAAACACCTCTTGGTCTTGGGGAGCCTCAAATAATCTGGCCTACTGTAGAAGATGTCAGATGCTCTTTAGAGGGCTATGCTGCTGGAAATGCAATTCCAAGTCCTTTTAAAAATGTGGAGAAAACATTTCTCAAAAAGTATTGGGCCAAATGGAAAGCAGACCATACTGGTCGAAGCCGTGCTATGCCCCATATAAAGACTTTCACTCGTTATAGTGGTCAGAATCTAGCTTGGTTCTTGTTGACTTCAGCAAATCTTAGCAAAGCTGCCTGGGGAACTCTTCAGAAGAATAATACTCAGTTCATGATTCGCTCATACGAGTTGGGAGTGCTCTTTCTACCAACGATGCTTAAAAGGGCTGGTGGTGGATTTTCATGTACCAGTAATGTTACACAAACTGAGGATAAATATGAAGTGAAGAAAGCAAAACTAGTTAGCCTAAGTGGGCTGAGAAGGGAGCAAACACACTCAACATCTCAACTGACCATTCCGTTACCTGTTCCTTACGAGCTCCCTCCCCAACCTTATTCCTCACAAGATGTTCCCTGGTCCTGGGATCGGCGATATAGTAAGAAAGATGTATATGGCCAAGTTTGGCCACGCACGCGGACACCTCTTTATGCTATAAAGGAACCTCCAGACCCCATTGTTTCTTCACAATTCTCATTTTCATTCTCTCTTTGTTGTCCGAAATCCTTCAAGATGCAAATCTTTGTGAAGACCCTCACTGGAAAGACTATCACTCTCGAGGTCGAGAGTTCCGACACCATCGATAACGTCAAGGCAAAAATTCAAGATAAGGAAGGGATCCCACCGGATCAGCAACGTCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTCGTTCTCCGTCTCCGTGGTGGCATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAAAGCTCCGACACCATTGACAACGTCAAGGCTAAAATCCAGGATAAGGAGGGTATTCCACCGGACCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGGCGCACCTTGGCCGACTACAATATCCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGTCTCAGGGGAGGCATGCAGATTTTTGTTAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTGGAGAGCTCCGACACCATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGGATCCCCCCGGACCAGCAGAGGTTGATCTTCGCAGGGAAGCAGTTGGAAGATGGAAGGACCCTTGCTGATTACAATATTCAGAAGGAGTCTACTCTTCACCTTGTGCTTCGTCTCCGTGGTGGATTTTAA | 2730 | 0.4564 | MSLSHPKTEVGYLVPLNHNLEENPSAPKLPISHGTNLIGRANIPLPLPDKRLSRNHITLTASSDGSAHLLVEGTNPVVVNSRNKRRKLNSQENAAISDGDILELIPGHHLFKYEVSGATKTDNTPSAGTGTTNKEASHSLSQDGNGTCSQEQGRNAAARKPGHSQSGEHSNAEAIRNFHIPSEKIPSTFRLLRVQQLPPWANTSCVAIDDVIQGDILVAILSNYMVDLDWLVPACPALLKVPHVLVIHGESDGRVDYLKRSKPANWILHKPPLPISFGTHHSKAMFLVYPHGIRVIVHTANLIYVDWNNKTQGLWMQDFPWKDQNSLSKGSVFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGYHSGAGIKKWGHMKLRSLLQECTFDDDFKRSPLIYQFSSLGSLDEKWMAELTSSMSAGLSEDKTPLGLGEPQIIWPTVEDVRCSLEGYAAGNAIPSPFKNVEKTFLKKYWAKWKADHTGRSRAMPHIKTFTRYSGQNLAWFLLTSANLSKAAWGTLQKNNTQFMIRSYELGVLFLPTMLKRAGGGFSCTSNVTQTEDKYEVKKAKLVSLSGLRREQTHSTSQLTIPLPVPYELPPQPYSSQDVPWSWDRRYSKKDVYGQVWPRTRTPLYAIKEPPDPIVSSQFSFSFSLCCPKSFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF | 909 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip05g01367 | 909 | PANTHER | - | 681 | 836 | - | - | |
| Aip05g01367 | 909 | SUPERFAMILY | Ubiquitin-like | 756 | 832 | IPR029071 | - | |
| Aip05g01367 | 909 | MobiDBLite | consensus disorder prediction | 118 | 170 | - | - | |
| Aip05g01367 | 909 | ProSitePatterns | Ubiquitin domain signature. | 783 | 808 | IPR019954 | - | |
| Aip05g01367 | 909 | CDD | Ubl_ubiquitin | 681 | 756 | - | - | |
| Aip05g01367 | 909 | Pfam | Tyrosyl-DNA phosphodiesterase | 189 | 623 | IPR010347 | GO:0005634|GO:0006281|GO:0008081 | |
| Aip05g01367 | 909 | Gene3D | - | 18 | 116 | - | - | |
| Aip05g01367 | 909 | CDD | PLDc_Tdp1_1 | 206 | 341 | - | - | |
| Aip05g01367 | 909 | PANTHER | UBIQUITIN | 750 | 908 | - | - | |
| Aip05g01367 | 909 | CDD | Ubl_ubiquitin | 833 | 908 | - | - |
Showing 1 to 10 of 40 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip05g01367 | K10862 | - | gmx:100793746 | 1018.45 |
Showing 1 to 1 of 1 entries