Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01364 ATGAGGCTTTTGGAGTCTGTGGCTGCTGATATAAAGGCTAATGTTGTGCTAGCCGAGGATGGAAGCGGCAAGTTCAAGACGGTGGCAGAGGCTGTGGCTTCTGCACCTGACAACAGTAAAACAAGGTACGTAATCTATGTGAAGAAGGGAACGTACAAAAAGAATGTTGAGATCGGTAAAAAAAAGAAGAACGTCATGCTTGTTGGTGATAGTATGGATAAAACAATAATCACAGGGAGCTTGAATTATGTGGATGGAACTCCCACCTTCCAAACTGCCACCATTGGTGACACCAAGCTCCGATCTGAAGCCTGTGGTCAAGACTTATCTGGGTCGTCCGTGGAAGAAGTATTCAAGAACAGTGGTGATGGAATCCTTCCTAGACAATCACATCGATCCAGCTGGATGNNNNNNNNNNNNNNNNNNNNNACACTGTATTACGGAGAGTACATGAACAATGGGCCGGGTGCTGGTACCAGCAAAAGGGTCCATTGGACCGGTTACCATGTGTTCTGGCAAGGATACTCTTTTCTGAGGTATAGCTGGGTTATGCTCTTTCTGTCACTACAACATCTTAGCTCGGAAGCGTAG 591 0.4467 MRLLESVAADIKANVVLAEDGSGKFKTVAEAVASAPDNSKTRYVIYVKKGTYKKNVEIGKKKKNVMLVGDSMDKTIITGSLNYVDGTPTFQTATIGDTKLRSEACGQDLSGSSVEEVFKNSGDGILPRQSHRSSWMXXXXXXXTLYYGEYMNNGPGAGTSKRVHWTGYHVFWQGYSFLRYSWVMLFLSLQHLSSEA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01364 196 Pfam Pectinesterase 14 96 IPR000070 GO:0030599|GO:0042545
Aip05g01364 196 Pfam Pectinesterase 134 180 IPR000070 GO:0030599|GO:0042545
Aip05g01364 196 PANTHER PECTINESTERASE 2 96 - -
Aip05g01364 196 Gene3D - 9 111 IPR012334 -
Aip05g01364 196 PANTHER PECTINESTERASE 134 173 - -
Aip05g01364 196 Gene3D - 112 186 IPR012334 -
Aip05g01364 196 SUPERFAMILY Pectin lyase-like 11 178 IPR011050 -
Aip05g01364 196 PANTHER PECTINESTERASE 134 173 - -
Aip05g01364 196 PANTHER PECTINESTERASE 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01364 Aip-Chr5 20239775 20240622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01364 2 96 Carbohydrate Esterase AT1G11580 67.010 2.05e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01364 K01051 - gmx:100815836 154.066