Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01363 ATGGAGCCTCAACTCTCGGACCTCATGTCCAGGGCAAGAACCTCTCTCGCCATGTTTGTTGCAGTCTTGCCAACAAAGACCCATCAGCACCAACTCCTTGAGGAGCCACTCAACCGAGAGTTTCCCTCATGGGTCACACGCACCGATCGGAGGCTTTTGGAGTCTGTGGCTGCTGATATAAAGGCTAATGTTGTGGTGGCCAAGGATGGAAGCGGCAAGTTCAAGACGGTGGCGGAGGCTGTGGCTTCTGCACCTGATAACGGTAAAACAAGGTACGTAATATATGTGAAGAAGGGAACGTACAAAGAGAATGTTGAGATCGGTTCAAAGAAGAAGAACGTCATGCTTGTTGGTGACGGTATGGATGCAACAATTATCACCGGCAGCTTGAACTTTGTCGATGGAACTGGCACCTTCCAATCCGCCACCGTCGCCGCCGTTGGTGATGGGTTTATAGGGCAAGACATTTGGTTTCAAAACACGGCAGGGCCAGAGAAGCACCAGGCGGTGGCACTCCGTGTGGGCGCCGACACCTCCGTGATCAACCGGTGCCGCATCGATGCCTACCAGGACACTCTGTACACCCACAGCAACAGGCAGTTCTACCGTGATTGCGTCATCACTGGCACTATCGACTTCATCTTTGGAAATGCTGCTGTTGTGTTCCAGAATTGCAACCTGGTGGCCCGAAAGCCCATGAGCAACCAAAAGAACATGGTGACGGCCCAAGGACGCGAAGACCCCAACCAAAACACAGGGACCTCCATTCAGCAGTGCAAAATAACAGCGAGTTCGGATCTGAAGCCCGTGGTGGGGTCCATCAAGACTTATCTGGGGCGGCCATGGAAGAAGTATTCAAGAACGGTTGTGATGCAATCTTCAATAGATGGGCATATTGACCCCGCAGGATGGTCTGAATGGGATGATAAGACAAAGGACTATTTGGAAACGCTGTATTATGGAGAGTATATGAACAGTGGTGCTGGTGCTGGCACCAGCAAGAGGGTTACGTGGCCTGGTTACCACATCATCACCAGTGCCGCAGAGGCTAGCAAGTTCACAGTGGCTCAGCTAATCCAAGGCGATGTTTGGTTGAAGAACACCGGTGTTAACTTCATTACAGGCCTCTAG 1131 0.5172 MEPQLSDLMSRARTSLAMFVAVLPTKTHQHQLLEEPLNREFPSWVTRTDRRLLESVAADIKANVVVAKDGSGKFKTVAEAVASAPDNGKTRYVIYVKKGTYKENVEIGSKKKNVMLVGDGMDATIITGSLNFVDGTGTFQSATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADTSVINRCRIDAYQDTLYTHSNRQFYRDCVITGTIDFIFGNAAVVFQNCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCKITASSDLKPVVGSIKTYLGRPWKKYSRTVVMQSSIDGHIDPAGWSEWDDKTKDYLETLYYGEYMNSGAGAGTSKRVTWPGYHIITSAAEASKFTVAQLIQGDVWLKNTGVNFITGL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01363 376 SUPERFAMILY Pectin lyase-like 60 375 IPR011050 -
Aip05g01363 376 Pfam Pectinesterase 63 362 IPR000070 GO:0030599|GO:0042545
Aip05g01363 376 ProSitePatterns Pectinesterase signature 1. 88 107 IPR018040 -
Aip05g01363 376 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Aip05g01363 376 Gene3D - 56 376 IPR012334 -
Aip05g01363 376 PANTHER PECTINESTERASE 1 374 - -
Aip05g01363 376 PANTHER PECTINESTERASE 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01363 Aip-Chr5 20202596 20205297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01363 1 372 Carbohydrate Esterase AT1G11580 69.786 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01363 K01051 - gmx:100815836 640.188