Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01358 ATGCAGGGCCAAAGTTTACATTTACATGGGGGAACCTTGCCACCTTTACATCCAAGCCTTCCAACTGCTCCATCACAAATGATGTCTCATCCCCATGCCGATGCTTCGGTGACAAGTCAACCACCACCTGCATATCTTAATTTGATTAGTTCACTAGTGAACCACGGTGTGATCTCAGTAACTAATCCACCCACCAATCCACCCACCGTACTGGATTTTATTGGGATGGAGTTCGATCCAGATATCTTGAAGGTGAACCGAATGTCGAAAAGCCGGAAGCAGAAGGGATCTCAAAAATGGTTTGCAAGTGGGAGCATGTGGCTAAGTGGTGTAGAGGCTTCGGGAAAGGAATCGATTCCAGGGTTCGTTGGCTCCCGAGGATACAGAGGAAATGAAAGATGA 402 0.4726 MQGQSLHLHGGTLPPLHPSLPTAPSQMMSHPHADASVTSQPPPAYLNLISSLVNHGVISVTNPPTNPPTVLDFIGMEFDPDILKVNRMSKSRKQKGSQKWFASGSMWLSGVEASGKESIPGFVGSRGYRGNER 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01358 133 MobiDBLite consensus disorder prediction 1 41 - -
Aip05g01358 133 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 86 124 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aip05g01358 133 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 15 85 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aip05g01358 133 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 86 124 - -
Aip05g01358 133 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 15 85 - -
Aip05g01358 133 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01358 Aip-Chr5 20133380 20133967 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01358 9 123 C2H2 Transcription Factor Family AT4G04885 33.540 4.85e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01358 K14400 - ahf:112721559 124.79