Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01357 ATGGTTCCTCAATTGTTTAAATCTATCCTCTGCCAGGTGCCTGCTGATAAAAAACTTCCTTCTCTCTATCTTCTGGACAGTATTGTGAAGAATTTTGGCCAGGAATATGTTAAACACTTCTCTTTACGTCTACCTCAAGTTTACTGTGAGGCATACAGGCAGGTCCAGCCCAATCTGCATTCTGTTCTGCAACGTCTCTTTGCAGTTAATAATCAACAATCCTTTGCTAATCACCTTGGGGCATATGATTTTCGTGGACCGATTCTTGGGGAACATGTTATTAAACCACAATCCTTGCAACAGATGGAACACTCTAGTTCAATTATGGATAATGTTGGTGGTGATAGGTTGGACTCAACAGAAACTGTAGGCTGTGAAATTCCTAGTACTAAGCTTTTGTTGGTGGAGCAGCCTGGCAAAAATGGTTTAGGGAGCAAGTTTTCATTGGCATCATGGCAGGACACTGAAGAAGAGGAGTTTGATTGGAAAGATATGAATCCAGGATTAGTAGACTGTAGTAGAAACAGCAGTTCTATGCAATCAAGTGTTAGATTCTCCAGGAAAAGGAAGTTATCTAATGATCTATCTAATTCTTCACAGTACCCCTTTAATATTGGGGCTGCTCCCCCTGCTGTCAATGCTCATGCTACCCGTCCTTTCGGCTTGAATCCAGCATTTTCATTGCAAAAACGTCCTAGGAGTCTGTTTGAACCAATAAACGTTAATAATAACACCAATGTGGGTCATGGTCCAAATAGAACTCTGTTTATACATGACCAGTTGCCTAATCAACCTGGACCAATTTCCTCTAACCTGCAAAATCATGGACAACCTCCTCAACTACAATTTCTTCCACCTCAAGTTCCATCTTCAACACAAATTAGTCATGGTGCCCAATAA 900 0.41 MVPQLFKSILCQVPADKKLPSLYLLDSIVKNFGQEYVKHFSLRLPQVYCEAYRQVQPNLHSVLQRLFAVNNQQSFANHLGAYDFRGPILGEHVIKPQSLQQMEHSSSIMDNVGGDRLDSTETVGCEIPSTKLLLVEQPGKNGLGSKFSLASWQDTEEEEFDWKDMNPGLVDCSRNSSSMQSSVRFSRKRKLSNDLSNSSQYPFNIGAAPPAVNAHATRPFGLNPAFSLQKRPRSLFEPINVNNNTNVGHGPNRTLFIHDQLPNQPGPISSNLQNHGQPPQLQFLPPQVPSSTQISHGAQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01357 299 MobiDBLite consensus disorder prediction 241 299 - -
Aip05g01357 299 MobiDBLite consensus disorder prediction 173 197 - -
Aip05g01357 299 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 8 241 - -
Aip05g01357 299 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 8 241 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aip05g01357 299 SUPERFAMILY ENTH/VHS domain 5 67 IPR008942 -
Aip05g01357 299 Gene3D - 2 105 IPR008942 -
Aip05g01357 299 Pfam CID domain 6 71 IPR006569 -
Aip05g01357 299 ProSiteProfiles CID domain profile. 1 110 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01357 Aip-Chr5 20131879 20133350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01357 10 69 C2H2 Transcription Factor Family AT4G04885 55.000 2.65e-17 80.5