Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01304 ATGCAAGCTCATGCAGCACTTGAAGCATGGACACATTGCATGACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACTGGCATCTACTGTGCACCAGCACCAGATGACTCCACCATTTTTACAGTGGCTGGAATTGACCTTAAGAATGCAAACATATCTGGTTCATTACCTGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAATAGATTCACCGGTCCTCTCCCTAAGAATTTTACCAAACTTGCCTATCTTTATGAGCTTGATATCAGTTTTAACCAATTCTCAGGACCCTTCCCACAAGTTGTTCTTGCCATTCCTTCACTGAGATACTTGGATATTAGTGTGGCCAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACGGGGCTAACGGGTCCATTGCCCCAAGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAACTACCAGGAACCATGCAAGGAATGAAGAGCTTGGAACAATTGGTTTTAAAGCATAACAATTTCTCAGGTGTGGTTCCGACCGGCATTTCGATTGACCAAGCATTGAATGCCCTCGACAGATGTCCTCAACCTGATGTGCGCCGCAACAATCCAAGGAATAAACATAAGGCGTTCACAACACCAAGCACAAAGAGCATGCTTCGGTGGGCTGGCGTATTACCCAAGAAAAAGACCTACCAATGA 762 0.4423 MQAHAALEAWTHCMTSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTIFTVAGIDLKNANISGSLPEDLGLLTDLDFFHINSNRFTGPLPKNFTKLAYLYELDISFNQFSGPFPQVVLAIPSLRYLDISVAKMKDTLNEIIISNTGLTGPLPQEIGYLDKVTVFDVSFNRLEGELPGTMQGMKSLEQLVLKHNNFSGVVPTGISIDQALNALDRCPQPDVRRNNPRNKHKAFTTPSTKSMLRWAGVLPKKKTYQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01304 253 Gene3D Ribonuclease Inhibitor 2 135 IPR032675 -
Aip05g01304 253 Gene3D Ribonuclease Inhibitor 136 230 IPR032675 -
Aip05g01304 253 SUPERFAMILY L domain-like 15 211 - -
Aip05g01304 253 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 2 127 - -
Aip05g01304 253 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 127 - -
Aip05g01304 253 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 128 203 - -
Aip05g01304 253 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 128 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01304 Aip-Chr5 19096276 19101909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01304 1 202 Leucine-rich Repeat extension Gene Families AT3G22800 42.692 2.62e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01304 - - aip:107640307 408.683