Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01300 atgagcactcagttaacgggagttggagggtgtggtggtttgtgtccacgatggttgccttcttacgacgacgcctcCGGCAGAAATCCATCAACCAGCAAAACCCTAATCTGCCCCCGATTTCTCAGAGCTTTTGACAAACGATGGCGTCAAGATTTTGGACCCAGGGTGCGAGCGATTCTGAGGAAGAAAGCAGTGACTTTGATGAGGTTGAAGAGACGACGGCTGAGGCGGGTTGTCCGGTCGGCAAAGGATAAGCGATTCGAGGAGATGGCTTCTACCGTTGATCAGATGAAGAATGCCATGAAGATCAATGATTGGGTGAGCTTGCAGGAGAGCTTTGATAAGATCAACAAGCAGCTTGAGAAGGTCATGCGTGTTACCGAGTCTGAGAAGGTCCCCAGTCTCTACATCAAGGCCCTGGTGATGTTGGAAGACTTTTTGGCTCAGGCTTTAGCCAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCTAAGGCTTTGAACTCGATGAAGCAGAAGTTGAAGAAGAACAATAAGCAATATGAGGAACTGATTAACAAATGCAGGGAGAGCCCTGAGAGTGAGGAGGAGAAAGAAGAGGAGGAATCTGAGGAAGAGTATGAGAGTGATGGTGAGATTATCGAGCCGGATCAGCTTAAGGGAAGAGATGACCTGAAATCAGATTCTGAAGTCTCTCACTATGAAGATGAAAAGGTCGATGCTGGTGAGGGACCCTGGGACCAAAAACTTAGCAAGAGAGACAGACTTATGGATAGGCAATTCATGAAAGACCCTAGTGAGATCACTTGGGACACCGTCAACAAGAAATTCAAGGAGGTTGTGGCAGCAAGGGGCAGGAAGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACTTTCCTTACAAAAGTTGCTAAAACACCTGCACAGAAGTTGGAGATCCTTTTTAGTGTGGTATCTGCCCAGTTTGATGTTAACCCTGGCCTAAGTGGGCACATGCCCATTAATGTTTGGAAAAAATGTGTGCATAACTTGCTGGTCATTCTTGACATTTTAGTGCAATACCCTAACATAGTTGTTGATGATGCCGTGGAGCCAGATGAGAATGAAACACAGAAGGGCCCTGACCATAATGGACCAATTCGCATTTGGGGAAACTTGGTCGCTTTCTTGGAAAGAATAGATGCCGAGTTTTTCAAGAGTTTGCAGTGCATAGATCCACATACTCGTGAGTATGTTGAGAGACTCAGGGATGAGCCAATATTTCTTGTTCTTGCTCAGAATGTCCAGGAATACCTTGAAAGGGTTGGAGATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCGTTTACTACAAACCACAGGAGGTTTATGTTGCAATGAAAAAATTGGCCGAGCTGGCTGAAGATGGGGATAATGAAGGGGCTGGTGAGGAGAAAGGGTTTGAGGATACAAGAATTCCCACCCCATTTATTGCTACTCCTGAGCTTGTGCCCCGCAAACCTACCTTCCCTGAGAACAGCAGGACTCTAATGGACATATTGGTTACCCTGATATACAAGTATGGTGATGAGCGCACTAAAGCACGGGCAATGCTTTGTGACATATACCACCATGCTCTTCTTGACGAGTTCTCAATATCCCGTGATCTGCTGCTCATGAGCCACTTGCAAGACAGCGTTCAGCATATGGACATATCAACACAGATACTGTTTAACAGGGCTATGGCACAGTTGGGTCTATGTGCTTTTCGGCTTGGGTTGATTTCCGAAGCACATGGCTGTTTATCTGAACTTTATTCTGGTGGAAGGGTGAAGGAGTTGCTTGCACAAGGAAAGGTTGGAAAGAAGGCGTCAGATGCCATATCATATGCACATAAATCTTGA 1902 0.4401 MSTQLTGVGGCGGLCPRWLPSYDDASGRNPSTSKTLICPRFLRAFDKRWRQDFGPRVRAILRKKAVTLMRLKRRRLRRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPSLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRESPESEEEKEEEESEEEYESDGEIIEPDQLKGRDDLKSDSEVSHYEDEKVDAGEGPWDQKLSKRDRLMDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVHNLLVILDILVQYPNIVVDDAVEPDENETQKGPDHNGPIRIWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPIFLVLAQNVQEYLERVGDFKAASKVALRRVELVYYKPQEVYVAMKKLAELAEDGDNEGAGEEKGFEDTRIPTPFIATPELVPRKPTFPENSRTLMDILVTLIYKYGDERTKARAMLCDIYHHALLDEFSISRDLLLMSHLQDSVQHMDISTQILFNRAMAQLGLCAFRLGLISEAHGCLSELYSGGRVKELLAQGKVGKKASDAISYAHKS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01300 633 MobiDBLite consensus disorder prediction 156 253 - -
Aip05g01300 633 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 77 618 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aip05g01300 633 MobiDBLite consensus disorder prediction 157 176 - -
Aip05g01300 633 MobiDBLite consensus disorder prediction 177 196 - -
Aip05g01300 633 MobiDBLite consensus disorder prediction 215 253 - -
Aip05g01300 633 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 77 618 - -
Aip05g01300 633 MobiDBLite consensus disorder prediction 197 214 - -
Aip05g01300 633 Coils Coil 166 193 - -
Aip05g01300 633 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 76 623 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01300 Aip-Chr5 19054318 19057596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01300 77 617 Eukaryotic Initiation Factors Gene Family AT3G56150 70.524 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01300 K03252 - gmx:100781967 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01300 05 19054318 19057596 Aip05g01300 05 19054318 19057596 ECH