Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01297 ATGAATGAAGGGGTTTCTTCCAAAGAAGAGAGTAAGAGTATTGATCTAACTAGGATCACTCTTCGAGAAACGGATCTTTCTGATGTGGAAGATCACATGGTGTGGTCAAGCGATGCAAAGGTGACAGAGTTCTGTACCTGGGGGCCTTACACCAGCAAAGAAGAAGCCATAGACTTCATCAACGGAATACCAAACATATTTTCATGGTATAGGGCCATCTGCCTTGACAATCAAGCAATAGGGTCGGTTTCTGTGTGCTTGCAAAGAGATAGATACAGAGAAAAAGTAGCTGAAGTCGGATATATTCTGGCTTCAGAGTACTGGGGAAAAGGGATTGTTACACATGTTCTAAAGCAAGTTGTTAAGATTGTATTCAGCATGTATCCTCAGGTTGAAAGGCTTGAAGCTCTCACTGACAATGAGAATTTGGCGTCTCAAAGGGTTTTGGAGAAAGCTGGTTTCCAAAGAGAGGGTGTTCTTAGGAATTATGTGTATGTTAAGGGCAAAAGCAGAGATGTGGCCATTTATAGTTTTCTTCCAACTGATCTTCACTCAGAATTTGCTTCTCTCAAGCTTTAA 579 0.4145 MNEGVSSKEESKSIDLTRITLRETDLSDVEDHMVWSSDAKVTEFCTWGPYTSKEEAIDFINGIPNIFSWYRAICLDNQAIGSVSVCLQRDRYREKVAEVGYILASEYWGKGIVTHVLKQVVKIVFSMYPQVERLEALTDNENLASQRVLEKAGFQREGVLRNYVYVKGKSRDVAIYSFLPTDLHSEFASLKL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01297 192 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 11 183 - -
Aip05g01297 192 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 172 IPR000182 GO:0016407
Aip05g01297 192 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 183 - -
Aip05g01297 192 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 18 179 IPR016181 -
Aip05g01297 192 Pfam Acetyltransferase (GNAT) domain 18 155 IPR000182 GO:0016407
Aip05g01297 192 Gene3D - 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01297 Aip-Chr5 19011310 19012174 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip05g01297 Acetyltransf_3 6e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01297 - - mtr:MTR_5g006520 209.149