Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01296 ATGATGGAGAGAGACAGAGAAGAGAGTGTTGATTTAGCGCAAATTAGTCTTCGACCCCTTCAGCTCTCTGATGTTGATGATCTCATGGTGTGGACCACTGATGAAAAAGTAACCAAGTTTTGCACTTGGGAAACTTACAGCAGCAAAGACCAGGGCATTGACTTTATTCAAAATAGAGCATGCGAGTTTCTATGGGGCAGAGCAATATGCCTTAATGACCATGCTATTGGCTTTATCTCTATGACCTCGTCTTCTGCTTCCGATAAATCAAGGGAGAAATCAGTGGAACTTGGATATGTTCTAGGTTCTAAATACTGGTCCAGAGGGATTATGACTTATGTTGTAAAACAAGTGAAGAAGGTTGCATTCAGAGAGTTTCCACACTTAGAGAGGCTTGAAGCTCTAGTTGATGCAGAAAATGTGGGGTCTCAAAGGGTGCTGGAGAAGGCAGGTTTCCAAAAAGAGGGAGTACTAAGAAAATATTTGTGCCGCAAGGGAAAAAGCAGAGACACGATCATTTTCTGTGTTCTATCAACTGATCTTGATCACCAAGTTTGA 558 0.4194 MMERDREESVDLAQISLRPLQLSDVDDLMVWTTDEKVTKFCTWETYSSKDQGIDFIQNRACEFLWGRAICLNDHAIGFISMTSSSASDKSREKSVELGYVLGSKYWSRGIMTYVVKQVKKVAFREFPHLERLEALVDAENVGSQRVLEKAGFQKEGVLRKYLCRKGKSRDTIIFCVLSTDLDHQV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01296 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 177 IPR016181 -
Aip05g01296 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 170 IPR000182 GO:0016407
Aip05g01296 185 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 9 181 - -
Aip05g01296 185 Gene3D - 12 184 - -
Aip05g01296 185 Pfam Acetyltransferase (GNAT) domain 16 153 IPR000182 GO:0016407
Aip05g01296 185 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01296 Aip-Chr5 19009576 19010664 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip05g01296 Acetyltransf_3 3.3e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01296 - - ccaj:109810875 254.603