Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01295 ATGATAGGGCCAGTGACCTTGGTCCCAACGGACAGCAACTGCGTACTTACAGAACTGCTTCTGTCACTGTTTTCGCCAACCATTTCTCTGCTCGCAATATCAGCTTCAAGAAACCTGAAACCTCTTAGGGTTCATATGGAGCACGCAGATTTTACTAGAGACAGCAATGGCAGTTCAGATGGTGGCACAAGAGAAGTGCGCCCACCAATAGCATTTGATTTCTATAACCATTATGCAAAATTTGTTAGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTATTTGTTTGCTCTTGTGAGGGATTTAGACCAGAGAAATATTATAATATGGAAAACAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTGCGGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCAAAAACATGATTGCCTTGATCCTATGGATATGTATAATGAGATCACTAGGCGAAGGCGTCATGTCCTAGGTGATGCTAGAGCAGCATTGCGATACCTCAAAAACCAGAAAGCTGAATATCCTTGCCTCTATTATGAGCACATAATTGATGCTAAAGGGGTATTGCGAGCTCTATTTTGGTGTGATGGAAGAAGCCAATTAGATTATGAAGTATTTGGAGATGTGCTTGCCTTTGATGCGACATACAAGAAAAACAAGTACTTGTATCCGCATTTTAAGCGATGTCTTACCTACCTACGATATAAGGAGATTGAGGCTGACTATGTTTCCATATCTGGTCTGCCGGTACTTACAACAGTATTGGAACCTTTGGAAAGTGTGCTGGTGTTTTTTAACATCCTTGAGCTGCCAAAGTCTCTTGTGTTGACAAGGTGGTCGAAAAATGCCAAGACAAGCACTTTCGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGCCAATATGGATGCTTGATGGATTGGTGTTGGCAACTGTCCTATGTCGCTAGTCGAAGGCAAGAGAGATTCCACCTTATTCGAGACACTGTTATGAGCCTAATCGAAGATTTCAAGATTGAAGATGAACAAAAAAAGCAAGTTGGTGCTGAAGCTGATAGTTCGGATGGTATTTTTCTTAAGAATCCACAAAATTGTAGATCTAAGTGTTGTCCAGGTGAAAAGGTAAAACGAAAACCACAACGATGTGGTATTTGTTGCATGGAAGGGCACAATAAAATATCTTGTCCATTGGCAAAGGATATTCAGCAGACCAATGCGAGTTGTGAAACTTCTCATGGCATAAATGGGAACCCTTTTGAGGAAGGTTTGGATGCAGATGCAAATGCAGAAATGGAGGTTCTGATGCAAGTGCTGACATGA 1392 0.4124 MIGPVTLVPTDSNCVLTELLLSLFSPTISLLAISASRNLKPLRVHMEHADFTRDSNGSSDGGTREVRPPIAFDFYNHYAKFVSFGARKSKTWKNSKGEYVKQLFVCSCEGFRPEKYYNMENRKREPKSETRCGCLARFVVRFAAYTGRWHVALFVESQKHDCLDPMDMYNEITRRRRHVLGDARAALRYLKNQKAEYPCLYYEHIIDAKGVLRALFWCDGRSQLDYEVFGDVLAFDATYKKNKYLYPHFKRCLTYLRYKEIEADYVSISGLPVLTTVLEPLESVLVFFNILELPKSLVLTRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCWQLSYVASRRQERFHLIRDTVMSLIEDFKIEDEQKKQVGAEADSSDGIFLKNPQNCRSKCCPGEKVKRKPQRCGICCMEGHNKISCPLAKDIQQTNASCETSHGINGNPFEEGLDADANAEMEVLMQVLT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01295 463 PANTHER OS03G0181600 PROTEIN 174 247 - -
Aip05g01295 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 167 IPR031052 GO:0006355
Aip05g01295 463 Pfam FAR1 DNA-binding domain 73 162 IPR004330 -
Aip05g01295 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 174 247 IPR031052 GO:0006355
Aip05g01295 463 PANTHER OS03G0181600 PROTEIN 71 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01295 Aip-Chr5 19003990 19008938 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01295 FAR1 3.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01295 - - adu:110280242 324.324