Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01293 ATGGTCATGGGCACGCCGGAGAGGAACCAGATCAACCCTTCCCTCTCTCGTGTCCAGGATTCCCCTGTATTCAATTTCATCAACGGTTTGTCGCCTATAAAGCCCGAGAAGCCTGATCAGATTGGTCAAACGTTTAGCTCGCTTAGCTTTCCATCCCCTCCGCGTGCTTTTGCTTCACCCAATCTCACCAGTTTCAAGGAATCAAAAGTGCTCAAGAGGCATAACCCTTTTGGGAAATCAAGGCCTGGGGTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGACGAGGCTATTGCAGATTCATGTCATCCATATCATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGCAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACCACAGGCCTTAAAATATAATAATTGGGGTAACCCTGGCTATGATCCTGGTCATGTGGATAACTCTCTTGATTCAATTGAAGTCCTTAATCAGGAGTTGGTTCGATTTGATCCGAAGGGGCAAGAATCAGAGCATTGTGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGAAGCAGCGGCTTTTAAGGATATAATGCAGAAGCCAGATTCCCATCTTATGTCTCTGATACCGGAATCTTCCATATATAATGGTCTGAGAGATGATAGCAAAGCTAAAATAGAAGAATATCATCCTGAGCCCTTAGCAGTCATAGACCAAATGCAGGACAAACATTACGTTGCCATAACTAGCAATACAAAAGACAAAGCAAATGTTGAGTTTGTTTCTGTGATGAACGGTAGTAAGCGGAGGCGATGTCTAGACTTTGAGACGGCCAATGTGCAAAGGAAGAATTCAGATCATAATTTAAAATTTGATTCTCTTGTACATTCTAATGAAAAGCAACTGGTTGCTGCAAAATGCAATAGTAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTAGATTTGAATGCACTTGCAGCTTTGAAGGGAGGCAAAAAAGTCATAAGTAATGACAATTGGTCTTGTGGAATTCATGTTAATCTTCCTAGTTGCACTTCCCTGCAAATCTATAACAGCCATGAATATCAGGATCCATTGGCAATGGAGGTGGATTTATCAGACATTGGGCCTCAGCCAATTGAGGATAGTTCCTATGCATCAGATTTCACTGTTGATGAAGATGTCAATCAAAATAGTCCCCAAAAGAAAAGACATGGAGACTGCAAGCGTTGTAATTGCAAAAAGTCAAAGTGTTTGAAACTATATTGTGAGTGCTTTGCTGCTCGTACCTACTGCACTGGCAACTGCTCATGTAAGAATTGCCACAACAAACTTGATCATAGAGAGGAAGTCCTTCAAGCTCGCAAGCAGATTGAGTCGCGCAACCCTCTCGCTTTTACTCCTAAAGTCATCTCTGAACCTGAAATTGGGAATGACCCAAATAAAACTCCAGCACCATCACGACACAAGAGAGGATGTAACTGCAAGAAATCACTCTGCCAAAAGAAATACTGTGAATGTTTTCAGGCTGGTATTGGATGTTCCATGAACTGTAGATGTGACGCGTGTAAGAACACGTTTGGTAGAAAGGATGGAGTAGAAACTCAACCAGAAGTAGAAATAGAAGCCTGTGATAAAGAAGTTGTTGAAAGTTCATTACAGAAAATTGAAATTCAGAACTTCGACGGGGTGTCTAGTTCATTGAATTTTCTGTCAGAAGAAAAGATATTTGGGACTCTTTGCTCTCAGCCATTTGAGCATTCTCAAGCTGTTTCAGACCAGGAAATGATAGATATTTTTGGAGAGAGAGGTAGAAGTGGATAG 1869 0.4141 MVMGTPERNQINPSLSRVQDSPVFNFINGLSPIKPEKPDQIGQTFSSLSFPSPPRAFASPNLTSFKESKVLKRHNPFGKSRPGVSSEDGNKFQTSDEAIADSCHPYHNSRESQGNFHDGISAVDDSIALPGEHTDFSAEIPQALKYNNWGNPGYDPGHVDNSLDSIEVLNQELVRFDPKGQESEHCDNLISGDTDFFVFNSPNEAAAFKDIMQKPDSHLMSLIPESSIYNGLRDDSKAKIEEYHPEPLAVIDQMQDKHYVAITSNTKDKANVEFVSVMNGSKRRRCLDFETANVQRKNSDHNLKFDSLVHSNEKQLVAAKCNSSSQQCTMPAVGLDLNALAALKGGKKVISNDNWSCGIHVNLPSCTSLQIYNSHEYQDPLAMEVDLSDIGPQPIEDSSYASDFTVDEDVNQNSPQKKRHGDCKRCNCKKSKCLKLYCECFAARTYCTGNCSCKNCHNKLDHREEVLQARKQIESRNPLAFTPKVISEPEIGNDPNKTPAPSRHKRGCNCKKSLCQKKYCECFQAGIGCSMNCRCDACKNTFGRKDGVETQPEVEIEACDKEVVESSLQKIEIQNFDGVSSSLNFLSEEKIFGTLCSQPFEHSQAVSDQEMIDIFGERGRSG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01293 622 MobiDBLite consensus disorder prediction 29 53 - -
Aip05g01293 622 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 576 - -
Aip05g01293 622 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 506 541 IPR005172 -
Aip05g01293 622 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 424 459 IPR005172 -
Aip05g01293 622 ProSiteProfiles CRC domain profile. 422 543 IPR005172 -
Aip05g01293 622 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 576 IPR044522 GO:0003700
Aip05g01293 622 SMART CXC_2 503 544 IPR033467 -
Aip05g01293 622 SMART CXC_2 421 462 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01293 Aip-Chr5 18980352 18983825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01293 18 547 CPP Transcription Factor Family AT4G14770 38.129 8.07e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip05g01293 TCR 5.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01293 - - aip:107640306 1264.98