Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01278 ATGTTCTCTTCCTCCAACCCTTCTTCTTCCTCTTCTTCTTACCCTCCTCCTCCTCCTCTTCTTCATCCCTTCTATGTTGATGATTCTCACAATGATAGCAATGCTTTTGTTGTTGCAAATAGTGATGGAAGTATGTTTGACCCATCTTCATCTCTTGGGACGACTACTCATCAAGCTCCATTACTGTTCCCAGCAGCAACAAATCTGAATGTTGCTGACTATGCTGCCATGCTCCAAAGGGACTGTTCTTATTATGATTATGGTGGTGGTGCTAGTGCTGCTGGTGTTGTGGGAGGTCATAATGGTCTGAACTTGTTGACAAAGAAAGGGAAGAAAGACAGGCACAGCAAGATTTTTACATCTCAGGGTTTGAGGGACAGAAGGGTGAGGCTTTCAAGCGAGATTGCTAGAAAGTTCTTTGATCTTCAGGACATGCTTGAGTATGACAAACCCAGCAACACCCTCCAATGGCTCTTCACTAAATCTGAGAATGCTATCAGAGAGCTTCAAAGAACCAAGCAAGCTAATTCCACCACCTGTTCTCATCATGATCATCACACCTTCTGCTTCACCTGCTTCTCATCATCAAAGGACAAGAGATTCCCTCCTCCAGATTCATCAGATCCTCATCATCATCAACTTATGGATGTTGAGCTTCAAGACCCTAATCTACTAAGAACCAATTTCATGAGCCTTGAGATCCCTCAACATCAGGAAGCTAGTTTCAACAACATTAATAACAATAACAACCACTCATCATGCCCCCATTCCCCTCCCAATTGGAATTTATACCAATGA 798 0.4311 MFSSSNPSSSSSSYPPPPPLLHPFYVDDSHNDSNAFVVANSDGSMFDPSSSLGTTTHQAPLLFPAATNLNVADYAAMLQRDCSYYDYGGGASAAGVVGGHNGLNLLTKKGKKDRHSKIFTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSNTLQWLFTKSENAIRELQRTKQANSTTCSHHDHHTFCFTCFSSSKDKRFPPPDSSDPHHHQLMDVELQDPNLLRTNFMSLEIPQHQEASFNNINNNNNHSSCPHSPPNWNLYQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01278 265 PANTHER TRANSCRIPTION FACTOR TCP12 108 183 - -
Aip05g01278 265 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 108 183 IPR005333 GO:0003700
Aip05g01278 265 MobiDBLite consensus disorder prediction 242 265 - -
Aip05g01278 265 Pfam TCP family transcription factor 110 213 IPR017887 -
Aip05g01278 265 ProSiteProfiles TCP domain profile. 111 169 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01278 Aip-Chr5 18762235 18763032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01278 106 176 TCP Transcription Factor Family AT1G67260 63.380 2.86e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip05g01278 TCP 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01278 - - aip:107640299 440.654