Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01267 ATGCACCCCACGTGTTTGATTTTTGGTCTGGAAGCCTTCCCTGCTCCAATTTTCTGCTTCTCAGGTCTCAATTTTTTCTCTTTTGTTTATTCTGTTGGTGTTGGTGTTGGTGTTGGTGCTGGTACTGGTGCTGGAGTTGGTGGTGGTGTTGGTGGTGGTGGTGGTGGTGGTTGTAGTGGTAGTGGGGCAGGGATGATGAGTAGTACTAGCAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTTATCCCCATTCAGAAGAGCTTTGACTCCATTTCCCATTCCTTCTTCCACCACCCTGCCCTGAGTTATTGTTCTTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGAACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCGGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCTATGACACAGTCATCATCCACTGTGACATCACTGACTGCTACAACTGGTGGCAGCAGTGGAACTGGAAGTTACCAGAACCTTAACACAATTACCTTTGCTAATCCTCAAGGCACTGGTTCTGGAGCTGAACAGACACATTATCATTTGGATTCTATCCCCTATGGGATTCCAAGCAGAGAGTACAGGTATCTTCAGGGAAATAAATCAGAGGGTGGCGAACAGAGTTTCTTTTCCAAAGCTTTAGGAAGCAACAAGGAACTTCGGATCGAAACGCAGCTGGAAAACACTTTGATGCCAACCAGAGTTGCCTCCTTCTCAACATCAAGATCAAACAACAACTCCATTTTGCAGGGTGATTATCTGCAGAATTCATATTTATCCGACGAGCATGCATCGGGTGAATCTGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTTGATGAATGGCCTAGGAGCAGGGATTCATGGTCTGGTCTGGAAGCAACTCAGCTGTCCATGTCCATTCCTATGTCGGCGTCGAACTTCTCTACAGCCAGCTCTCAATCCTCGCATGGCGAGACTAAATAA 1110 0.4811 MHPTCLIFGLEAFPAPIFCFSGLNFFSFVYSVGVGVGVGAGTGAGVGGGVGGGGGGGCSGSGAGMMSSTSRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISHSFFHHPALSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQSMTQSSSTVTSLTATTGGSSGTGSYQNLNTITFANPQGTGSGAEQTHYHLDSIPYGIPSREYRYLQGNKSEGGEQSFFSKALGSNKELRIETQLENTLMPTRVASFSTSRSNNNSILQGDYLQNSYLSDEHASGESVKHEGQSLRPFFDEWPRSRDSWSGLEATQLSMSIPMSASNFSTASSQSSHGETK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01267 369 MobiDBLite consensus disorder prediction 161 202 - -
Aip05g01267 369 PANTHER GROWTH-REGULATING FACTOR 5 70 360 - -
Aip05g01267 369 Pfam QLQ 73 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip05g01267 369 ProSiteProfiles WRC domain profile. 134 178 IPR014977 -
Aip05g01267 369 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip05g01267 369 PANTHER - 70 360 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aip05g01267 369 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip05g01267 369 MobiDBLite consensus disorder prediction 175 202 - -
Aip05g01267 369 Pfam WRC 135 177 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01267 Aip-Chr5 18482593 18485857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01267 71 177 GRF Transcription Factor Family AT3G13960 63.964 8.92e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aip05g01267 WRC 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01267 - - ahf:112749828 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01267 05 18482593 18485857 Aip05g01267 05 18482593 18485857 ECH