Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01264 ATGATTCAGACTGCTGATATGAGACTTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGCACATATAACCATTCTCTCATGGGGTCAAAGGCTGAAGAATTTTCTGATGAAAACTGTCGTTTAGGGGAGGCCAATAATCACTGTTCTATGGACCAGAGCAATTTATCTTCTCTTAGGAGTAAAGCTTCTGAAAACTTGCAGCATGCTGTTAGTGAAACCAGTAACATTCTCAGTGTTAATTCTAGTCAGGATTCTCTATCTGAAAATGCCCAGAGTAAGCAGGTCTTGTCAGATAAGTATCAGGGCTCAAAATATTTAGAAGGCCATGATGATAACATTTCTAGTATTAGTAGAGCCAGTGATTCTAATTTAGAGAACACCAGCCATCAAAGAAATGCAGAAAGAATAAATGCTTGTAGTTCAGCTTCAGTTAGTCATGTAGGCGCAGAAGGATCTGTTGGTACTCCATCTGTTGATATGTCTGGTTTGTCTGAGATTCCATCCTCTAAAGATGCAGATAGTGGGCATAGCACATCTAAGGTACAAAGCATGAATGGACAATCTCAAAGTGGTAAATCTCTCTCAAATAGTGCAAGGTTAATTCATCCAGAAGGGAAATTATTGTCTCGTATCCCTGAAAAGTTGTTAGAAAGCCCTAATGAAAACCCTAATTCATCATTGAACAAAGAGGCAGCATCTACTGTTGTATCTGGTGAGAAATCAATTGCCAGTAATGATAGCCCTAATGACAGTATTGCCAAGGTTTCATCGGAAGTTTGTCCAAAGTCAGAAGCAGGTACTGATAACATAGGTGATGCTAAAGATGAAAGCTTTAAAGGTTCAGTCCGTGATGGACAGCATGAGAAGACTGAGGAGTTGGTTAAATCCCCTTTTAAGCAGGAACTTCAATCTGAAGATGAGAGTGATGAATTGGATGCTGTGGAACATGACGTAAAAGTGTGTGACATATGTGGAGATGCTGGTCGGGAGGATCTACTAGCTATATGCAGTAGGTGCAGTGATGGTGCTGAGCACACCTACTGCATGCGAGAAATGCTTCAGAAGGTCCCTGAAGGGGAATGGTTATGTGAAGAATGTAAATATGCAGAGGAGACTAGAAATCAAGGGCTTGAAGCTGAGGAGAAAATAATTCTTAAAGGTAGTTTAACTTCACAAGTTTCTAACAAACGACTTTTGGAAAACATTGAAGTAGCTTCTGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGGTCACCAAAGGCATCGAGTCCTAAAAGATTAGTCCCTCTGTCTCGTGAATCTTCGTTTAAGAACTTAGATAAAGGAAAGGTGAAGCCTGGTCATCTGATGCCTATTCATAATCATTCTAGCGGTGATGACACAGAAGTTGCTCGATCTCCTTCCATTGGTCCCCGAAGTCAAATTCCTAAGAGTACATTATCGAAATGTAGTTCTTTCAACAACTTGAGTTCCAAGCCTAGAGTCAAAATTGTTGATGATGTTGTTCCCCAGAAACCGAAAGGGGCTGGTGATCAGTCTTCCAAGAATATGGAGATGCCTGCGCGCATGACAGGAAAATCAACGTTATTCAAATCCTCAAGTTTGGGTAGGTCAAGTACAACTGCACCAAAAGTTAAAATGCTTTCGCCCAAGTCTGCAACTGTCCAGGAGCCGAAAGGACTAAAACATATGAAAGAATCAGGTGCATTTGACAGGAAATTTCCAGCTAGGACTGATCGGCCTGTTGTTAGTTCATCAATAGCTAGTTCTGTTGTGTCTACAGCTAAGGGTGATCAGAAGCTAACATCTCGTGGTGAAACCACTAAACCTTCAGCAGTATGCAACAATCGAGAGTTGAGGGTTAACCAGGATGGAAAATCAAATACATCATATAAGTTAGTGAGTAATGTAAGTCAGAAAACTTTGGAGCCTCAAGTTTGCTCAGAGAAAACATCAACCAATATTGATGAAGCTGTACAGGACGTCCTGCCTCGGCCACGAGAGACAGCAAATCAGGTTGAGAAAACCAGAGGTGGTTCTGATGATCGTGTGAGGCCAGGTTTTAGTAATGCTTCAAAAAATCCAATCTGTCAAAAATGTAAAGAATATGGCCATGTTCTGGAATTTTGTACAGCTGGTAATACACAGGAATCTGGAGCTGAAGTATCATTCTCTGCTTCAAGTAGTTCAATTGAGGATATGCATAAGGGTAATAAATTGAAAGCTGCAATCCAGGCTGCCCTACTTAGAAGGCCTGAAATATACAAGAAGAAAGAAACACCTAATCAAACTGATGGGGTTTCTCCATCAGGCACAAACTTGAATGGTGAAGTCATTTTGCAAGACCAACCAATTGTTTCGAGCTCGCCAAAGAATATTGTATCAGCTGTAGAAACCCGGGAACAGCAAGAAATCCTTGAGAGTTCTACATCTGATTCGATCAAATGTTTGTCTGATGATGATTTGAAGCAACCAAAAGTTTCTCCAACTGGTTTTTGTTCTCAACCAGTAAAGTCAGATTCTGTTGGCCTTGCTGCTGGAAAGCCTGTAGTAAGAGATTTGTCTAATAAAGCTTTGGCCATCCCAATTGCCATTTCGAAGATGTTGGTCATTCCAGAATATGAATATATCTGGCAGGGTGTATTTGAAGTGCATCGAAATGGAAAGCCTCCTAATTTTTGTGCTGGAGTCCAAGCACATTTATCCTCTTGTGCTTCCCCAAAGGTTCGTCAGGAAGTGAACAAGTTTCTACCCAAAGTTACCCTGAATGAAGTTCCTCGTTTGAGCACATGGCCTTCACAATTTCGTCAAGTTGGCACAAGAGAAGATCATATTGCTCTTTACTTCTTTGCCAAAGATATTGAGAGTTATGAGAGGCACTACAAGGGTCTAGTGGATCACATGATTAGAAGTGATTTAGCACTTAAAGGAACTTTTGATGGTGTTGAACTTCTTATATTCCCGTCCAGTCAACTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTATTTAGGGGGAGGAGGATCAGTCATTCAGATTCTACAGAAAAAAATTGTATTCCCAGTCTGAATGCAGTGCCAGTTGAAGAGGATTCTACTACTGCTGTTGTGACCAAGTCTGAAACACATTGCTCCCAAAAATACACAGATGAAAAAACAATTGCCTGTGATGAAGTATGCGCTGCACGTCCTCCATCTGGTTATATAGACCAACCTCGGATTACAGCAAGTATGATCAATGATAACAATGACCAGACACATCTGGGTTTGCAAGTAAAATTGGAGAAGCAAGATAGTGGAGTTGACATCAAATCTACATCAGTGGTTCCAATTGACAGTACATTTTTATGCCACGAGATGAAATCCACTGGTTCATCACTGAAACCTAATGGACTAGAACATGGACAGTGCAGAGAGTCTAAGCCTCCTGAAGCGATTGGGATTAGTGTAAATACAAGAACTGTTGAAACAAAAACTGGTTTTGACATTTCTGTAAAGCAAGAGAAAGCCTTGTTGACAGAGATTCCCTCTGTTGGCAAACAAGAAAGAGGTACTCCAAGCAGTGTTGTTAATCATAAAATGTCAGAGAGAGTGAACAGTGACGAAGATCAGCAAAATCCCAGTATGAAACAGAAAGCAGATGATCACTATATTGACTTGGAAGCAACAACTTCTTGCGATCAAGGAAAAGGTGCCGAAAGCCATTCGATTAAACAAAAAATTTCAGGGAGGATAAACAGTGATGAAGAAGGTCAGCAAAGGCCTAAGAGAAAACCAAAAGGTGTTTACTTTATTGACTTGGAGGCAACTGTTGGAGATCAAGAAACAGAGACTGCAAGCAATGACAGTAAGGATAGAATTTCTGAGAGAATGAATGGTGATGAAGATCAGCAAAGGCCTAAGACGAAGCAGAAAGATTATCATTATATTGACTTGGAGGCACCTGTAGACAATCATGACCAAGATTCTGCAAACAGTATTTGTAAGGATGAAGTTTTGGGGAGAATGGATGGCGAAGGTAAGCAATGGCCAACAAAGAAACAAAAAGATTATCATTATATTGACTTGGAGGCAAACAATGAGGAGGAAGTTCAATATGTAGATCTTTCTGACACAGTTATGCAGGCTCCTGTAGTCAGTTGTCAGAAACGGTCTTGGGACGAGGTAAATGGAAAATTGGAAGATGGAGGAAGCTCTAGCAAGAAGCTGAAGGCAGGTTTTGGTGGGATTTATGGGGGTTCCAGTTCTGAAGGTAGGGACTCTCTTGAAATCGGTTCGTCTTCTTCAGTTGAGGGAAAAGGGTGTAAAGAAGCTTGTGAGGAGAAAATCATCCCTGAGGATGTTGGATCAATCGAAAGAACCTTCTTTCCCGTTGATAACTCACGGATGGTGCTAAGCAGCACGTTGCTAAAAGGGCCTCATGAGTACAGGGACCGATTTCATGATGCAATTCCAAATCTAGAGCTTGGTTTAAGGGGCGAAACAATACCACCTCCACCTCCACCTCGACAGCGAATGCTTCCTTTCCTTGTTGGAGCAGTAGACAGGAAAAACATCCCAGAAATCTGTCCAGATGGCTTGGCAAACGAGCAGGAAGATGATGATGGTGATGCTGCATCTCTTTCACTTTCTCTATCATTTCCAACTTCCAACAAGGACCCAAAAATACCTGCTACAAAAGCAGCAGAGGTCTTACCTGATGAGCATCGTGTGAATAGTTCGTTCCTCCTTTTTGGAAGATACACAGACAAATAA 4785 0.4127 MIQTADMRLESGTCNVCSAPCSSCTYNHSLMGSKAEEFSDENCRLGEANNHCSMDQSNLSSLRSKASENLQHAVSETSNILSVNSSQDSLSENAQSKQVLSDKYQGSKYLEGHDDNISSISRASDSNLENTSHQRNAERINACSSASVSHVGAEGSVGTPSVDMSGLSEIPSSKDADSGHSTSKVQSMNGQSQSGKSLSNSARLIHPEGKLLSRIPEKLLESPNENPNSSLNKEAASTVVSGEKSIASNDSPNDSIAKVSSEVCPKSEAGTDNIGDAKDESFKGSVRDGQHEKTEELVKSPFKQELQSEDESDELDAVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGEWLCEECKYAEETRNQGLEAEEKIILKGSLTSQVSNKRLLENIEVASAAKRQALESSTGSPKASSPKRLVPLSRESSFKNLDKGKVKPGHLMPIHNHSSGDDTEVARSPSIGPRSQIPKSTLSKCSSFNNLSSKPRVKIVDDVVPQKPKGAGDQSSKNMEMPARMTGKSTLFKSSSLGRSSTTAPKVKMLSPKSATVQEPKGLKHMKESGAFDRKFPARTDRPVVSSSIASSVVSTAKGDQKLTSRGETTKPSAVCNNRELRVNQDGKSNTSYKLVSNVSQKTLEPQVCSEKTSTNIDEAVQDVLPRPRETANQVEKTRGGSDDRVRPGFSNASKNPICQKCKEYGHVLEFCTAGNTQESGAEVSFSASSSSIEDMHKGNKLKAAIQAALLRRPEIYKKKETPNQTDGVSPSGTNLNGEVILQDQPIVSSSPKNIVSAVETREQQEILESSTSDSIKCLSDDDLKQPKVSPTGFCSQPVKSDSVGLAAGKPVVRDLSNKALAIPIAISKMLVIPEYEYIWQGVFEVHRNGKPPNFCAGVQAHLSSCASPKVRQEVNKFLPKVTLNEVPRLSTWPSQFRQVGTREDHIALYFFAKDIESYERHYKGLVDHMIRSDLALKGTFDGVELLIFPSSQLPENSQRWNMLFFLWGVFRGRRISHSDSTEKNCIPSLNAVPVEEDSTTAVVTKSETHCSQKYTDEKTIACDEVCAARPPSGYIDQPRITASMINDNNDQTHLGLQVKLEKQDSGVDIKSTSVVPIDSTFLCHEMKSTGSSLKPNGLEHGQCRESKPPEAIGISVNTRTVETKTGFDISVKQEKALLTEIPSVGKQERGTPSSVVNHKMSERVNSDEDQQNPSMKQKADDHYIDLEATTSCDQGKGAESHSIKQKISGRINSDEEGQQRPKRKPKGVYFIDLEATVGDQETETASNDSKDRISERMNGDEDQQRPKTKQKDYHYIDLEAPVDNHDQDSANSICKDEVLGRMDGEGKQWPTKKQKDYHYIDLEANNEEEVQYVDLSDTVMQAPVVSCQKRSWDEVNGKLEDGGSSSKKLKAGFGGIYGGSSSEGRDSLEIGSSSSVEGKGCKEACEEKIIPEDVGSIERTFFPVDNSRMVLSSTLLKGPHEYRDRFHDAIPNLELGLRGETIPPPPPPRQRMLPFLVGAVDRKNIPEICPDGLANEQEDDDGDAASLSLSLSFPTSNKDPKIPATKAAEVLPDEHRVNSSFLLFGRYTDK 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01264 1594 ProSiteProfiles Zinc finger PHD-type profile. 322 373 IPR019787 -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 151 314 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1186 1315 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 673 687 - -
Aip05g01264 1594 SUPERFAMILY FYVE/PHD zinc finger 312 377 IPR011011 -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1190 1204 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1217 1231 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 536 564 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 161 201 - -
Aip05g01264 1594 SMART PHD_3 324 371 IPR001965 -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1533 1566 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1288 1315 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 673 696 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 112 135 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 587 615 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 466 487 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 110 135 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 222 260 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 415 487 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 586 615 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 272 308 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 1252 1273 - -
Aip05g01264 1594 MobiDBLite consensus disorder prediction 536 552 - -
Aip05g01264 1594 PANTHER - 7 173 - -
Aip05g01264 1594 PANTHER - 1363 1585 - -
Aip05g01264 1594 PANTHER - 203 1242 - -
Aip05g01264 1594 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 384 IPR013083 -
Aip05g01264 1594 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 203 1242 - -
Aip05g01264 1594 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 173 - -
Aip05g01264 1594 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1363 1585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01264 Aip-Chr5 18442756 18451537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01264 321 383 C2H2 Transcription Factor Family AT3G01460 34.921 6.99e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01264 - - adu:107488482 3032.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01216 03 12046885 12052520 Aip05g01264 05 18442756 18451537 ECH
Aip05g01264 05 18442756 18451537 Aip05g01264 05 18442756 18451537 ECH