Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01260 ATGCCAACAAAAATCATGGTTTGTACTAACAACCAATGCAACCTTTCTCACAAGAAGAAGGAAAAAAAAAATCCCCTTTTCTATTTTTCTTTCTCTGTTGTTTTGCTAAGTTTTTTTTTTTCTTTTTTGCAGGGGGATGAAGAAGGTGGTGATTGTTTTGGAGAGAATAATAATAATAAGAGTAATGAAGAGAATAACAAGTGGCCACCATGGCTGAAACCGCTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGGTGATTCCCACAAAAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCACTTTGTTCTGCTTGTTTGGCTTCTCACAAAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGAGATAACAGGAGTTCAGACATACATAATAAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAACCAAGGCCCGGCAAAGGTGTCACCAACACTTGCCAGGTCTGTGATCGCAGCCTCCTTGATTCCTTCACCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACCTCCAAGAAGTACCAGAAGAAGAAAAAGTTAGATGATGATGATGATTCTGATGGTGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCGTCAACACCACCACCAACGGCGGTTACTTACAGGACTGCTAAGAGGAGAAAGGGTATCCCCCATAGAGCTCCAATGGGGGGAGGACTAATAATAGAATACTAA 801 0.4145 MPTKIMVCTNNQCNLSHKKKEKKNPLFYFSFSVVLLSFFFSFLQGDEEGGDCFGENNNNKSNEENNKWPPWLKPLLKTSFFVQCKVHGDSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFMEITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFTFCSLGCKIAGTSKKYQKKKKLDDDDDSDGEESMNGSGRNRIQSFTPSTPPPTAVTYRTAKRRKGIPHRAPMGGGLIIEY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01260 266 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 55 261 - -
Aip05g01260 266 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 55 261 - -
Aip05g01260 266 MobiDBLite consensus disorder prediction 204 266 - -
Aip05g01260 266 Pfam PLATZ transcription factor 124 195 IPR006734 -
Aip05g01260 266 MobiDBLite consensus disorder prediction 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01260 Aip-Chr5 18354371 18356830 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip05g01260 PLATZ 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01260 - - gmx:100810757 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01204 03 11930932 11933698 Aip05g01260 05 18354371 18356830 ECH
Aip05g01260 05 18354371 18356830 Aip05g01260 05 18354371 18356830 ECH