Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01244 ATGCCCCCATCGACTTCAGCTATGTTAAGAGAGTTCCATGGAACCCTTCAGCATGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATAATGATGAATTTGATTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACGGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTAATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTTGGTCGTGGCGGTTAAGAGGATCTTGGAATCTGATTTTAAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCAGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAAGGGAAGCCAGAGGTTTTTGGTTTATGATTACATGTCGAATGGAAACCTTGAAGACCATCTGTTTCTGGTCAGTGAGCAGCAAAAGTTGAAGAAATCGCAGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGACTGACTTATCTGTCGTGTGATGCATGTGTTCACGGTGATGTATTTATCGTTCAAATTGGGATTAGGGTTTATCCACTCCAGGGACTAATTTGA 813 0.4219 MPPSTSAMLREFHGTLQHVQHKLVSIDGNASHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGVYVWYDRKVRRKKLNNDEFDFDPEEQGSRRRLRPNTGSIWFKIDELEKATNNFSTKNFIGRGGFGLVFKGVLSDGLVVAVKRILESDFKGDVEFCNEVEIISNLKHQNLVPLRGCCVVDDDDEKFNDKGSQRFLVYDYMSNGNLEDHLFLVSEQQKLKKSQTWPQRKSIILDVAKGLTYLSCDACVHGDVFIVQIGIRVYPLQGLI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01244 270 ProSiteProfiles Protein kinase domain profile. 117 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01244 270 Gene3D Phosphorylase Kinase; domain 1 87 202 - -
Aip05g01244 270 Gene3D Transferase(Phosphotransferase) domain 1 203 256 - -
Aip05g01244 270 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Aip05g01244 270 SUPERFAMILY Protein kinase-like (PK-like) 97 254 IPR011009 -
Aip05g01244 270 Pfam Protein tyrosine and serine/threonine kinase 120 254 IPR001245 GO:0004672|GO:0006468
Aip05g01244 270 SMART tyrkin_6 117 270 IPR020635 GO:0004713|GO:0006468
Aip05g01244 270 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 18 64 - -
Aip05g01244 270 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 62 246 - -
Aip05g01244 270 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 64 - -
Aip05g01244 270 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01244 Aip-Chr5 18152960 18154246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01244 19 244 Receptor kinase-like Gene Family AT1G11050 55.859 1.58e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip05g01244 PK_Tyr_Ser-Thr 1.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01244 - - gmx:100806560 348.206