Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01239 ATGAAGCTTGTAATGACATTTTTGGTTTCTTACTACTTTGTTCATCGTCAGGGCCTAGAGAGAAGCTCAATTGGAGTCTCAGATTTAAGATTATTTTGGGAACTGCCGAGTGACTTTGCTATCTTCATAAGGGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGCTTCTAATATTCTTCTCTCTTGAGACTTTTGAGCCTCAGATATCTGATTTTGGCCTAGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTTTGCAAAGTAGAAAGCACATTCGGGTACCTTCCCCATAAATTCTTCATGCATGGAATAGTAGATGAGAAAACTGATGTATATGCTTATGGTGTGCTATTATTGGAGCTAATCACTGGAAGACAAGCTTTGGATAGCTCACAAAAAAGTCTTATCATGTGGGCAATGATAAATGATATATTCGCTCACCGCAAGCCTGCAAGAATTTTTGGAAGTGTTTTCTATTGCATGTTACTGGCAAGTTATGCTACCTTGGCCATAGGAACTGAGTGGATTTTTCGCCCCAAGCAAGAAGTGATCTCTCCGGTGCTTTGTAGTTACGATGTTCTTCTTTTGCTGTTAACATTCGCGGTGGCGGGTAGCAACAGCAGCGACGTGCGGCGACCGTCGGCAGTTGGATGCGCATCGGTTGGCTTTAGGAGAGAAGGACGCGGCATGCAGCTGACGAATAAAGGGGTGCAACATGCGGCGGTGTGCGGCTGTCGTAGAGAAGCACGGCGTGTGTCTGTAGAAAAGAGATAA 783 0.4419 MKLVMTFLVSYYFVHRQGLERSSIGVSDLRLFWELPSDFAIFIRDVKEGSFTRISRLLIFFSLETFEPQISDFGLAKWLPDQWTHHTVCKVESTFGYLPHKFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLIMWAMINDIFAHRKPARIFGSVFYCMLLASYATLAIGTEWIFRPKQEVISPVLCSYDVLLLLLTFAVAGSNSSDVRRPSAVGCASVGFRREGRGMQLTNKGVQHAAVCGCRREARRVSVEKR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01239 260 PANTHER OS08G0249100 PROTEIN 64 142 - -
Aip05g01239 260 SUPERFAMILY Protein kinase-like (PK-like) 65 156 IPR011009 -
Aip05g01239 260 Pfam Protein kinase domain 60 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01239 260 Gene3D Transferase(Phosphotransferase) domain 1 37 173 - -
Aip05g01239 260 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01239 Aip-Chr5 18118984 18125642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01239 64 142 Trihelix Transcription Factor Family AT1G68690 45.783 2.24e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip05g01239 Pkinase 7.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01239 - - aip:110271812 370.548