Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01230 ATGCTTGGTAAAGATATTCCGGAATGGAATTTGGCAAAACATATACAGGAGGTTATGAATTGGAATTGGAGAGTCTCTATTCTTTTAATTCAGAGGACTGCAAATAATGTTGCAGATTGTATGGCTAAAGCAGCTGCTTCTGTCGCGGACATTCACTCGAATTGGAGCCAACCATGGActccgtcgccgtcgtcaccattggagctgcgcgaagccgtcgtcgccgttgtcaccatcgatgcttctcgttgtcgtttgtgggttgtcgcctcttctgCTTCTGCTGTCACGCTGTCGTCTGCCCCTCTGGACATCGCTGCTTTTGAATCGTGTCCTGTCACTCGGATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCGCTGCCTCTAAATCCAAGGACGGAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTTTGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAGAAACATGAAGACATCGATCACCTCAGGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAAGCCTGCATTTCAGTCAATTTTGTTGA 675 0.3689 MLGKDIPEWNLAKHIQEVMNWNWRVSILLIQRTANNVADCMAKAAASVADIHSNWSQPWTPSPSSPLELREAVVAVVTIDASRCRLWVVASSASAVTLSSAPLDIAAFESCPVTRICCKKLSESGIDEKKHKPSTSNTAASKSKDGMEDYNFAMKRMMRNPYEYHHDLGLNYTLITDNLIVGSQPQKHEDIDHLRKEEGVTYILNLQQDKDVEYWGSLHFSQFC 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01230 224 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 163 218 IPR029021 -
Aip05g01230 224 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 113 216 - -
Aip05g01230 224 Gene3D Protein tyrosine phosphatase superfamily 164 216 IPR029021 -
Aip05g01230 224 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 113 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01230 Aip-Chr5 18019382 18020659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01230 133 216 Protein tyrosine phosphatase (PTP) family AT3G10940 73.810 8.16e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01230 - - aip:110271941 310.071