Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01227 ATGTTTGACACTGGTTACAAGTCACAGTATATTGGAGGCCAGAGGGAGAAGTTTGTAAGGTTGGATGATCTTGATTCTAACATGTCATTCTCAGGCAGACCAAGTTTGATGGATAGGCTAAGATCGATCTTCCATGTTGGCGGCCGCGCAAGGAAGAATCCGTCACAATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGGTCACTGAAAACTGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAAGACAAGCACCTTCTCCATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCTGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACGTCAAGTCATTCTGCCTCGCCATAGATAGCACGCTGGCGAATTTTACAGCAGCACTGAGGACTGTATTGGATTTTATCTATCTCCTGCGCATAAGCTTTCAGTTCCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTTGGAAGAGGTGAACTTGTCATAGATCCTGCAAAAATTGCCAGTAGATATTTACAGCGATATTTCATTATCGACTTCATGTCTGTGTTTCCTATGCCACAGATTATAGTGTGGAAATATCTATACAAAACAAGACATTCAGAGGTATTGAGTACAAAAACGGCACTGTTGAGAACTGTGATCCTGCAATATTTTCCAAGATTTCTAAGGTTTCTTCCATTAGCATCGGAAGTTAAAAAGACAGCTGGTGTTTTTGCAGAAAATGCACTGCTTGGAGCCATTTACTATTTGATTTGGTTTATGCTAGCTAGTCATATAACTGGCTCCGTTTGGTACTTACTTGCCATAGAACGCAATGACACATGTTGGAACAATGTTTGTCTTGAAGATAATAGATGTAACAGTCATTTCTTGTACTGTGGAAGTACCAATAAGCACATCCCAGGGTTTGATGCTTGGAAAAATGTCAGTGAGGATGTTCTTGTAAAGAAGTGCTTTGTTGATGGTGAGTTCAATTATGGAATCTTTGCTCAAGCAATCAAGAGTGGTATTGTTGCTTCTGTTGAAGTCTTTCCTAAGTTCTGTTACTGTTTATGGTGGGGCCTTCAAAATCTGAGTACAATTGGCCAAGGGCTTTCAACCAGCACCTACAGTAAAGAGGTGTGGTTTTCCATAGCAATAGCTGTTATGGGGCTCATCCTTTTCGCACTTCTGATTGGAAACATGCAGGTGAACAACACAGCAAGCATTATTGATATTCAATTTATTAAGGATGCTTATTGCTATGCAAATTTTCGACATTTGTATTatgtcatgaaaattcgacaaagttttatgttagttTGGCTGAATACCCGAGGCGTGGATGAAGAAAGCTTGATGAAGAGCCTTCCAAAAGATTTAAGGAGAGATATCAAACGGCATCTTTGTTTGAATCTGGTTAAAAGGGTTCCTCTCTTTGCTAACATGGAGGAACGCCTGCTCGATGCTATATGCGAGCGACTGAAACCTACTCTGTACACAGAGGGCACTGACATAGTTAGGGAAGGAGACCCTGTCAACGAGATGCTCTTCATCATCCGTGGACGCCTAGAGAGTGTCACCACAGATGGTGGAAGGAGTGGATTCTTTAACAGAGGGCTTCTCAAAGAAGGAGACTTCTGTGGTGAGGAGCTACTAACATGGGCACTAGATCCAAAAGCTGCAGCAAACTTGCCATCATCTACTAGGACAGTGAAGGCCATAAATGAGGTCGAGGCATTCGCATTGGAAGCCGAGGAGCTTAAGTTTGTCGCTTCGCAGTTTAGATACATTCATAGTAGGCAGGTTCAGCATACCTTCAGGTTCTACTCACAGCAATGGAGGACATGGGCCGCTATCTACATTCAAGCCGCGTGGAGGAGGTATATGAGGAGGAAACACACCATGCAAAGAAGGCAGGAGGAAGAGTATTATTATGATTCTGATGACAGTGGTGGTGATTCTGCAAAGGCCTTGGTTAAACGTTCCTCAAGTTCATCTAGCTTTGCCACAACCATGTATGCTTCACGCTTTGCCGCGAATGTACTTCACGGTCATAGGCTTCGTGAAGCAGGTAGTTCCACTAGTCTAGGAAGAATTCAAAAACCATCTGAACCTGACTTCAGTCATTATGGTCCAAAGTGA 2202 0.4228 MFDTGYKSQYIGGQREKFVRLDDLDSNMSFSGRPSLMDRLRSIFHVGGRARKNPSQSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKHLLHWNKFFEILCIFSVAVDPFFFYLPYFNVKSFCLAIDSTLANFTAALRTVLDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLQRYFIIDFMSVFPMPQIIVWKYLYKTRHSEVLSTKTALLRTVILQYFPRFLRFLPLASEVKKTAGVFAENALLGAIYYLIWFMLASHITGSVWYLLAIERNDTCWNNVCLEDNRCNSHFLYCGSTNKHIPGFDAWKNVSEDVLVKKCFVDGEFNYGIFAQAIKSGIVASVEVFPKFCYCLWWGLQNLSTIGQGLSTSTYSKEVWFSIAIAVMGLILFALLIGNMQVNNTASIIDIQFIKDAYCYANFRHLYYVMKIRQSFMLVWLNTRGVDEESLMKSLPKDLRRDIKRHLCLNLVKRVPLFANMEERLLDAICERLKPTLYTEGTDIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRYIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRRYMRRKHTMQRRQEEEYYYDSDDSGGDSAKALVKRSSSSSSFATTMYASRFAANVLHGHRLREAGSSTSLGRIQKPSEPDFSHYGPK 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01227 733 SUPERFAMILY Voltage-gated potassium channels 100 423 - -
Aip05g01227 733 ProSiteProfiles cAMP/cGMP binding motif profile. 498 581 IPR000595 -
Aip05g01227 733 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 730 - -
Aip05g01227 733 MobiDBLite consensus disorder prediction 710 733 - -
Aip05g01227 733 Pfam Ion transport protein 108 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip05g01227 733 SUPERFAMILY cAMP-binding domain-like 438 617 IPR018490 -
Aip05g01227 733 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 730 - -
Aip05g01227 733 ProSiteProfiles IQ motif profile. 634 662 IPR000048 GO:0005515
Aip05g01227 733 CDD CAP_ED 498 629 IPR000595 -
Aip05g01227 733 Pfam Cyclic nucleotide-binding domain 519 608 IPR000595 -
Aip05g01227 733 SMART cnmp_10 498 629 IPR000595 -
Aip05g01227 733 Gene3D Helix hairpin bin 434 489 - -
Aip05g01227 733 Gene3D Jelly Rolls 496 616 IPR014710 -
Aip05g01227 733 Gene3D - 109 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01227 Aip-Chr5 17993989 17998569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01227 6 727 Ion Channels AT1G15990 62.888 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01227 K05391 - gmx:100810453 1064.29