Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01223 ATGTTGTCAGTAGCTCCTTCTCTTGACAGCACCCAAACCCAACAACAACAGCAGCAGCAAAGGACGGCTGACCCAACCCAACAACCCAATTCTTCTCCCCAAAATGTCCACATCTTCAAGTCTAAATTACCCGATATACCCCTCTCCAACCACCTTCCTCTCCACTCTTTCTGCTTCCAAAGACTCAATGAAATCTCTGACCGTCCATGTCTCATCGTCGGTTCCGCCGGAAAAACCTACACCTACGGCGAAACATACCACGCCTCCCGGAGACTCGCCGCCGGCATGTCCGCCATCGGAATTACCAAGGGCGATGTCATCATGATCCTCCTCCAGAACTCAGCGGAGTTTGTCTTCTCCTTCATCGCCGCCTCCATGATCGGCGCTGTCGCCACCACCGCCAACCCGTTCTACACTCCCGCCGAGATCTTCAAGCAGATCACCGCCTCCAAGGCCAAGCTCGTCATCACGCAGGCAATGTACGTTGACAAGCTCCGAGACAGCGATTCCGCCAAAATCGGAGAGGATTTCAAGGTCGTAACCGTCGACGATCCGCCGGAGAACTGCCTGCACTTCTCAGCGATCTCCGAGGGAAACGAGAACGACCTACCGGAGGTTGAGATCCACCCTGACGACGCGGTGGCGCTGCCGTTCTCCTCCGGAACAACCGGTCTCCCGAAAGGAGTGGTTCTCACGCACAGGAGCTTAACGACGAGCGTGGCTCAACAGGTCGACGGAGAAAACCCTAACCTGTACCTGAAAACGGAGGACGTTCTTCTCTGCGTTCTTCCTCTGTTCCACATATTCTCTCTGAACAGTGTTCTGTTGTGTGCTTTGAGAGCTGGAAGCGCCGTGTTGCTGATGCAGAAGTTCGATATTGGAACGTTGCTGGAGCTCATTCAGAGGTACAGGGTTTCGGTGGCGATGGTGGTGCCACCGCTCGTGCTGGCTCTGGCAAAGAATCCGATGGTGGCGGAGTATGATTTGAGCTCTATAAGGTTGGTGTTGTCCGGAGCGGCGCCGCTCGGCAAGGAGCTCGAAGAGGCTCTCCGGAGCAGGGTGCCTCAAGCTGTTTTGGGACAGGGGTACGGGATGACAGAGGCAGGGCCAGTGCTGTCCATGTGCTTGGGCTTTGCGAAGCAACCATTCCCAACGAAATCAGGTTCATGTGGCACTGTTGTTAGAAATGCTGAGCTTAAGGTCGTCGACCCTGAAACTGGTTGCTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATCCGTGGTCAACAAATCATGAAAGGGTATTTGAACGATGATACAGCAACAGCAACAACTATCGATGTGGATGGCTGGCTGCATACCGGTGATGTTGGTTATGTAGATGATGATGATGAAATCTTCATCGTTGACAGGGTCAAGGAACTCATCAAATTTAAAGGTTTCCAGGTGCCCCCTGCAGAACTTGAAGCCCTTCTTGTAAGCCACCCCTCTATTGCAGACGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCATTCGTGGTTAGATCTAATGGCTTTGAACTCACTGAAGAGTCTGTAAAGGAATTCATAGCTAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTACTTTGTTCATGCAATTCCGAAGTCTCCATCAGGAAAGATATTAAGGAAAGACCTCAGAGCAAAGCTAGAAAACACCACCACCCTTAAGCCCTAG 1725 0.5165 MLSVAPSLDSTQTQQQQQQQRTADPTQQPNSSPQNVHIFKSKLPDIPLSNHLPLHSFCFQRLNEISDRPCLIVGSAGKTYTYGETYHASRRLAAGMSAIGITKGDVIMILLQNSAEFVFSFIAASMIGAVATTANPFYTPAEIFKQITASKAKLVITQAMYVDKLRDSDSAKIGEDFKVVTVDDPPENCLHFSAISEGNENDLPEVEIHPDDAVALPFSSGTTGLPKGVVLTHRSLTTSVAQQVDGENPNLYLKTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFDIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVAEYDLSSIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGCSLGYNQPGEICIRGQQIMKGYLNDDTATATTIDVDGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEALLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFELTEESVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENTTTLKP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01223 574 Pfam AMP-binding enzyme 64 472 IPR000873 -
Aip05g01223 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Aip05g01223 574 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Aip05g01223 574 SUPERFAMILY Acetyl-CoA synthetase-like 29 568 - -
Aip05g01223 574 PANTHER 4-COUMARATE--COA LIGASE 3 37 565 - -
Aip05g01223 574 MobiDBLite consensus disorder prediction 1 36 - -
Aip05g01223 574 Gene3D - 30 466 IPR042099 -
Aip05g01223 574 CDD 4CL 48 562 - -
Aip05g01223 574 Gene3D - 467 571 IPR045851 -
Aip05g01223 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01223 Aip-Chr5 17962487 17967455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01223 32 479 Monolignol Biosynthesis Gene Families AT1G65060 71.397 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01223 K01904 - gmx:547930 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01223 05 17962487 17967455 Aip05g01223 05 17962487 17967455 ECH