Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01205 ATGTTGGAATCACTTTACTTAAACGACAATCAACTCATTGGTGAGATTCCTGAATCAATCGGTAGCCTTCCTAGCCTTATAGTATGCAATGTCTCCAACAACAAGCTGGTAGGAACTGTTCCAGATACACCTGTATTTAGAAAGATGGATTTCTCAAATTTTGCCGGGAACAATGGGTTATGCCGATTAAGAACTTATCATTGTCATCCACCTGTATCTTCAACTCATTCAGCGAAAGCGAGCTGGATCAGAGATGGTTCAACTAGGGAAAAGATAGTTAGCATTGTTTATGGTGTGGTCGGATTTGTTTCTCTTATTTTCATAGATCTCTTGGAAGCCATCGAAAATTTTGCAGAATCAGCGGTTATAGGAAGAGGAGCTTGTGGCACTGTCTACAAGGCTATTATGAATGACGGCGAAGTGATTGCAGTGAAAAAGCTGAATTCTCGAGGAGATGGAGCAAACATTGACCGAAGCTTCCTTGCTGAGATTTCAACCCTTGGAAAAATCAGGCATAGGAACATTGTGAAGCTGCATGGATTGGAAAGTGTCACGGTTCTCTCCTTGCTAACGTCTCCGCCCTCCTGTCTCCAGAGTCCAGAGTCACTGCTGCCGTGCCGCGTCTCCGCATCCCCTTCTGGCCCTTCTGGCGTGCCTCCTTCTTCTTCTTCTTCTTCTAATACTGCGAATCTGCGTTCCTCTTCTCTCTTCGGTTTTCACTCTTCAGATTTCAGCAGAGAACGCCTACCTTTCGTCTTCGTCCTGCTGCCGCTGAACGCCGCACGCCCGCACCGCTACTGCCTATTGGGTTCTGCATTTTTGCTTCCTAGTTCCTATGTGAATCTGCGTTCCTCTTCTTTCATCGGTTTTCACTCTTCATACTTCAGCAGAGAACGCCTACCTTTCGTCTTCGTCCTGCTGCCGCTGAACGTCGCACGCCCGCACCGCTACTGCCTATTGGGTTCTGCATTTTTGCTTCCTAGTTCCTAG 990 0.4687 MLESLYLNDNQLIGEIPESIGSLPSLIVCNVSNNKLVGTVPDTPVFRKMDFSNFAGNNGLCRLRTYHCHPPVSSTHSAKASWIRDGSTREKIVSIVYGVVGFVSLIFIDLLEAIENFAESAVIGRGACGTVYKAIMNDGEVIAVKKLNSRGDGANIDRSFLAEISTLGKIRHRNIVKLHGLESVTVLSLLTSPPSCLQSPESLLPCRVSASPSGPSGVPPSSSSSSNTANLRSSSLFGFHSSDFSRERLPFVFVLLPLNAARPHRYCLLGSAFLLPSSYVNLRSSSFIGFHSSYFSRERLPFVFVLLPLNVARPHRYCLLGSAFLLPSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01205 329 Gene3D Ribonuclease Inhibitor 1 76 IPR032675 -
Aip05g01205 329 MobiDBLite consensus disorder prediction 214 228 - -
Aip05g01205 329 MobiDBLite consensus disorder prediction 208 228 - -
Aip05g01205 329 Gene3D Phosphorylase Kinase; domain 1 80 189 - -
Aip05g01205 329 ProSiteProfiles Protein kinase domain profile. 117 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01205 329 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 107 181 - -
Aip05g01205 329 SUPERFAMILY L domain-like 2 66 - -
Aip05g01205 329 SUPERFAMILY Protein kinase-like (PK-like) 94 182 IPR011009 -
Aip05g01205 329 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 108 - -
Aip05g01205 329 Pfam Protein kinase domain 119 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01205 329 PANTHER RECEPTOR-LIKE PROTEIN 55 1 108 - -
Aip05g01205 329 PANTHER RECEPTOR-LIKE PROTEIN 55 107 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01205 Aip-Chr5 17571245 17578642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01205 1 181 Receptor kinase-like Gene Family AT5G65700 33.333 3.58e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip05g01205 Pkinase 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01205 - - aip:110264972 320.472