Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01201 ATGGACCTGCAGCCCGAAACCGCCACGAGCTCCTCTCCCACCTTCGCTTCCATCGGCCGCAGGAGCTTGAAGGACATGTCCATTTCCGAGCTCATTTCAGTTCTGCGCGCCGATTTTGACACCGTTGAAGAGGTTTTGTTGGCCAGAGATGCCAAACACAAAGCTGAGATCAGTCCACTTTATGAACAGATCGAATTAGAGAGGCTAACGAGGCTTCGACTGGAATCGGAGCTGAAGACGAAGCAGGAGGGGCAGCGTTGTCACAAGTGTGAGAGAACACAAGAGGGTTACGAAATGTTGCTGAAGGAAGTGAAGAAGAGCGGGTTGAATGATTATAAGAACAATGCTATTATTGAAGAATTAAGGAACAAGAATCGAGAGTTGGAGATTCAAAATAGCAAAGCAACTGATGAATTGGCTACGATTAGGATCAGATGCAGTGAATTGGAGAATGCAAGGAATGCGAGTTTGGCTTCCATTGAGAAGCTTAGGGTTGAGAATTGCAAATTGAGAAAGGAATTGAATAAAAGGGTTAATGTTTTAGTCAAAGATGAACAAGACAAGGAATTCAATGAAATGGATGTTTGCGGTTCTACCTCTTTGCAAAGAATTAAAGACATTGGCAAAGGCCAATCTTCATCAGGTGGACTGTTCTTTAAAGTGTTGGATATGGATTCATGCAACAATGTGTCAGGGGATGCTGCATTTGAAGCTGTTGCTGAGGTTTACTCAGAGAGAGATGACGATGGACATCTAGAACCAGTTCCTAGAATGGAGTTTGATTCCTTAGAAGCTGTTCAGACATTTTACAAGAGGTATGCCAGGCTAATTGGTTTTGGTTGGAAGATCAGGACCTCGAAAAAAGGGTTTGATGGGAGACCAAATTATGTGGTACTTGCATGCACTCGTGGGGATCGCCGTGTATCTAGTATTTCGACAACTCTTCCGACCCAATTCACAAAATGTTCTGCAAAGATCAATGTGAAGAAAGGAAAAGATGGAAAGTGGATGATTAGAAAGGTAGATCTTGATCACAACCACGACTTAAGCCCGTTAAATTTCAAATACTCAGGAAACACGACTATTAGCACACTCATTTAG 1101 0.4305 MDLQPETATSSSPTFASIGRRSLKDMSISELISVLRADFDTVEEVLLARDAKHKAEISPLYEQIELERLTRLRLESELKTKQEGQRCHKCERTQEGYEMLLKEVKKSGLNDYKNNAIIEELRNKNRELEIQNSKATDELATIRIRCSELENARNASLASIEKLRVENCKLRKELNKRVNVLVKDEQDKEFNEMDVCGSTSLQRIKDIGKGQSSSGGLFFKVLDMDSCNNVSGDAAFEAVAEVYSERDDDGHLEPVPRMEFDSLEAVQTFYKRYARLIGFGWKIRTSKKGFDGRPNYVVLACTRGDRRVSSISTTLPTQFTKCSAKINVKKGKDGKWMIRKVDLDHNHDLSPLNFKYSGNTTISTLI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01201 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 146 350 - -
Aip05g01201 366 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 146 350 - -
Aip05g01201 366 Coils Coil 114 166 - -
Aip05g01201 366 Pfam FAR1 DNA-binding domain 268 350 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01201 Aip-Chr5 17519790 17523164 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01201 FAR1 8.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01201 - - ahf:112795650 681.019