Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01177 ATGGTGTTTAGCTTGGAGTTGATTTTGCAAGATGAGAAGGGTGGTAGAATTCATGCAACCATTTGCAAGTCTGCGTTGGAATTGTTCAATAATAGGATAAAGGAGCATGTTATTTATAGTATGCAAAATTTTATTGTGAAGCTTAACAATGGGAAGATTGTTGGAACCATTGTTTCTCTAGAGGTTGGTAAAGATGATTGGTCCTATACGTCTTGTAAGACATGTCCCAAGAAGGTTACACAGAGCAAAGATACGTATTGGTGTGATAATTGTTGGCGTGTAGGCTTCAAGGTTATGCTAAGGTATAGGCTCCAAGTAATTGTGACTGATGGAAGTAGTTGTCTCAAGCTCCTTGTGTGGAACAAAGAAGTAGAGCAAATGGTAGGAAAGGTTGTTGAGAAAGTTAAGGAATTATTTAATATCAATGCTGTGGAGGGGGTGTACAGCATCACAAAACTTTCGGACGACGAGTCCCTCACGTCCAGTTATGGTGTGGCCAACTCTTCTTGTGATGCTTCTTATTCGCAGATGCTAGCTAATATCCCTATAGCTGAAACAGACGAAAATAGCAATGAACATGCTGCAATTTCTCTGTCAAGGAGCAATGGCGTTAGCTCCTATCAAACTCCAGCCAAGAGAACCTCTCTTGATGTAGCTGATGACTCCACGGCAGAAGCAGCCCTGCCTCCAGATGTTCAAGCATCAGCAAACAAAACCTTTAAGAGGAACTGTGGAAGAAAAAAGATTGATTGA 753 0.4117 MVFSLELILQDEKGGRIHATICKSALELFNNRIKEHVIYSMQNFIVKLNNGKIVGTIVSLEVGKDDWSYTSCKTCPKKVTQSKDTYWCDNCWRVGFKVMLRYRLQVIVTDGSSCLKLLVWNKEVEQMVGKVVEKVKELFNINAVEGVYSITKLSDDESLTSSYGVANSSCDASYSQMLANIPIAETDENSNEHAAISLSRSNGVSSYQTPAKRTSLDVADDSTAEAALPPDVQASANKTFKRNCGRKKID 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01177 250 Pfam Domain of unknown function DUF223 6 53 IPR003871 -
Aip05g01177 250 CDD RPA1_DBD_C 53 142 IPR013955 -
Aip05g01177 250 CDD RPA1_DBD_A_like 3 53 - -
Aip05g01177 250 MobiDBLite consensus disorder prediction 204 235 - -
Aip05g01177 250 Pfam Replication factor-A C terminal domain 62 140 IPR013955 -
Aip05g01177 250 Gene3D - 30 163 IPR012340 -
Aip05g01177 250 SUPERFAMILY Nucleic acid-binding proteins 53 139 IPR012340 -
Aip05g01177 250 SUPERFAMILY Nucleic acid-binding proteins 5 53 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01177 Aip-Chr5 17071994 17073873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01177 69 138 Core DNA Replication Machinery Family AT5G08020 36.620 9.16e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01177 - - adu:107463979 301.212