Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01158 ATGTACTTGCAAGCTGACGGAGTGGTGGAGGTTAGCTACGTTGTGTCATCTAACTATCGACAACTTCCTAGAACACAAGGTTTGGATCATGTTATGACAAGCGATACAGTGGGTGCTAAAACTAAGATGATGGACTATGCAGAGGATAGGCGAGAGCAACAAGATTTGGTTATGATTGTGGATGGAATCGGGTCATTTGACGCCATCAATTTTACTTCAATCACAATACAAGAGATTCGGAGGATGGTGTTTGTTGACTTGCAAGCAGCATATGATTTTTATAATGAGTACAAGCACATGAAGGAATTCTCCATGCGGAGGTCTAAGGTTGGGCAAAGTATGAATGTTAGGACAGAGGGAGACTTTCTTTGGCAAATATTTGTGTGTTCGAGACAAGGCAAACGAGAGGTTCACGTTGACCAACCGAGTGGAAGATGGTATGTAGATTACTTTATTGACCAACATAATCATGAGATGCTGGATGCAAGGTTTAGGCAGTTGATGCGTTCCCACAGAGTAGTTAAGGAAGGAGACCTTCACCAAATTAATTTGATGAGGAAAACAGGGATATGGGTGCCGATGATATTTGGTGCATTCGCTAACCAATCCAGGGGGTTTGAGATGGTAGGGTTTGAAATAAAGATGTATATAATGCAATTGAGAAGCAAAAAAGAGTGGGAGCAAGTGATGTGGAGTGTGCCATTAGGAACAAGTAAAGCTGCAAAATTCTTGAGAGCCAATGAAATTTCTCTTTTCAAAGTACCAGAAGAAACAGTAGAGCTACTTGGGAAATCTGACCTGTATTTCTTTAGCCCCGAACCTCCTCCATTGACCGAACCAGCTCAAAAAGCCCTTGACTAG 861 0.4204 MYLQADGVVEVSYVVSSNYRQLPRTQGLDHVMTSDTVGAKTKMMDYAEDRREQQDLVMIVDGIGSFDAINFTSITIQEIRRMVFVDLQAAYDFYNEYKHMKEFSMRRSKVGQSMNVRTEGDFLWQIFVCSRQGKREVHVDQPSGRWYVDYFIDQHNHEMLDARFRQLMRSHRVVKEGDLHQINLMRKTGIWVPMIFGAFANQSRGFEMVGFEIKMYIMQLRSKKEWEQVMWSVPLGTSKAAKFLRANEISLFKVPEETVELLGKSDLYFFSPEPPPLTEPAQKALD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01158 286 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 236 286 - -
Aip05g01158 286 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 236 286 IPR044217 -
Aip05g01158 286 Gene3D - 227 286 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01158 Aip-Chr5 16840234 16843465 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01158 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01158 - - aip:107633138 216.468