Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01139 ATGGATAGCACCGCCGAAGCAAAATCCAAAAAAATCGAACGCCGCTACGATACTTTGGGAAAGAAGAGAAAGCGATCTATCAGGTTCGCCTCTTCCGAGGTAGCTGTCCTTCCTTCCATGGAAGATTCATCGTCCTCATCCTCTTCCCCCACTAATAACGCGCCAAAGCAGAACTGCACCGCTGTCGCATCCGCTTCCTATGGTTTAATATCTGTCATCGGCCGACGGAGAGTCATGGAGGACGCCGTTAGAGTGGTCCCCGGTTTCGTGCCGGTGGAAGACGAATCCGGAGGTTACGATTTCTTTGCAGTCTACGACGGTCACGGTGGAAGCATGGTGGCGAATACTTGCCGCGAGAAGCTGCACATGTTGTTGGCGGAGGAAATGAAGGAGGCAAAGGCAGCAGGGCCTTTGGATTGGCATCAAGTGATGTGCTCGTGCTTCATGAAGATGGACCAAGAGATTGTAGGTGACGAGGGCAACGATGACATGTCGGGTGGGAACACGATGGGTTCTACCGCAACGGTGGTCGTTGTTGGAAAGGAGGAGATTGTGGTTGGCAACTGCGGAGACTCTAGGGCGGTGCTGTGTCGCGGTGGCGAGGCCTTGCCGCTTTCACGTGATCATAAGCCTGATCGTGAGGATGAGAAAGAGAGAATAGAAGCAGCAGGTGGAAGAGTGATCGATTGGAATGGTAATCGTGTTTTAGGTGTTCTTGCTACATCAAGATCCATAGGGGACCACTACATGAAGCCATTTGTGATAGCTCAACCAGAGATACAGGTGTCCCGCCGAACAGATTCCGATGAGTTTGTGGTGGTGGCAAGTGATGGGCTGTGGGATGTGGTGTCTAACAGCTTTGCATGCCAACTTGTGAGAAATTACCTTAGTGGCAAGACCGACATGACCACATCCGCGGAGGCAGCTGCCACTTTGCTAGCCGAGCTTGCCATGGCTCGTGGTAGCAAAGACAACATCACTGTCATTGTGATCCAGCTCATTAACGCTGCTTCTCCTTCAACTCCTTCAACTTCAACATAA 1041 0.5168 MDSTAEAKSKKIERRYDTLGKKRKRSIRFASSEVAVLPSMEDSSSSSSSPTNNAPKQNCTAVASASYGLISVIGRRRVMEDAVRVVPGFVPVEDESGGYDFFAVYDGHGGSMVANTCREKLHMLLAEEMKEAKAAGPLDWHQVMCSCFMKMDQEIVGDEGNDDMSGGNTMGSTATVVVVGKEEIVVGNCGDSRAVLCRGGEALPLSRDHKPDREDEKERIEAAGGRVIDWNGNRVLGVLATSRSIGDHYMKPFVIAQPEIQVSRRTDSDEFVVVASDGLWDVVSNSFACQLVRNYLSGKTDMTTSAEAAATLLAELAMARGSKDNITVIVIQLINAASPSTPSTST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01139 346 ProSiteProfiles PPM-type phosphatase domain profile. 66 333 IPR001932 -
Aip05g01139 346 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 31 333 - -
Aip05g01139 346 Pfam Protein phosphatase 2C 69 326 IPR001932 -
Aip05g01139 346 SMART PP2C_SIG_2 83 333 IPR001932 -
Aip05g01139 346 MobiDBLite consensus disorder prediction 37 57 - -
Aip05g01139 346 SMART PP2C_4 56 331 IPR001932 -
Aip05g01139 346 Gene3D - 60 337 IPR036457 -
Aip05g01139 346 CDD PP2Cc 66 333 IPR001932 -
Aip05g01139 346 ProSitePatterns PPM-type phosphatase domain signature. 101 109 IPR000222 GO:0043169
Aip05g01139 346 SUPERFAMILY PP2C-like 62 333 IPR036457 -
Aip05g01139 346 PANTHER ALPHABET, ISOFORM E-RELATED 31 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01139 Aip-Chr5 16499007 16500655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01139 62 333 PP2C-type Phosphatase Gene Family AT2G29380 48.276 1.54e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01139 K14497 - gmx:100813248 392.119