Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01135 ATGGAGTGTGAAGGGAGTTGGGAGAAGAGCGAATTGAAAAGTGAGCTTGTTCAAGGGATGGAGGTAGCAAGAAAGCTTAAGGCAGAGTTAGAGTTAGAATCTAGTGCTGACAATAGGGACTTGCTGGTGGACAAAATATTATCTTCTTATGACAAAGCTCTATTGATCCTAAGATGGAGTGGATCAGTTTCCAAGCCCCACACATTGCATCAATCAACTAAAACCTCCCCACCACACTCCCCTCTACCCCACAATCATCAACAGGAACTTAAACACTCTTCACAGAAAAGAAAAATGATTTCTAAATGGGTGAATCAGGTTAAGGTGAATTCTGAGAATGGCTTTGAAGGATCCCATGAAGATGGGTACAGCTGGAGAAAATATGGACAGAAAGACATCCTTGGTTCCAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACTAAGGATTGCTGGGCAACCAAGCAAGTGCAGAGATCAGAGGATAATCCCAATATATTTGAAATAACTTATAAAGGAAGCCATACCTGTTCCAAGGGGAAGAAGAATGCTGCTATGTCAGCAAAGTCACCAGACATACAAGAACCACAAGAACACCATACAAACTTCCAAAACATGTTGTCAGTCACTGCGGCTAAGCCGGGAAACGAAGAAATGGCATGTTCTTTCACTTCCCCATCGACCTCCTCTGGATGCAGGACACAAGAAAACCAGAACTTGCTTCCTTCAATTCTAGAGAATAATCCCTTCTTGGGCAGTCTTTCACAAACACATTTGTTATTACCAAACACACCAGAATCAAACTATTTTCCATCTCCTTTCTGCGCAAATGAGCTTGATGGGATCTACAGCAATCGATGCTCGGAATTCGATGTTTCTGAGATCATTTCCGCCCATACATCAGCCACCAATCCTCCAATTTTCGATTTTGATTTCTCGCTTGATCCACTGGAACTTGGCCAAAATTTCCGTTTCAATGCCTCCAGATTTTCTCACTAA 1005 0.4239 MECEGSWEKSELKSELVQGMEVARKLKAELELESSADNRDLLVDKILSSYDKALLILRWSGSVSKPHTLHQSTKTSPPHSPLPHNHQQELKHSSQKRKMISKWVNQVKVNSENGFEGSHEDGYSWRKYGQKDILGSKYPRSYYRCTFRNTKDCWATKQVQRSEDNPNIFEITYKGSHTCSKGKKNAAMSAKSPDIQEPQEHHTNFQNMLSVTAAKPGNEEMACSFTSPSTSSGCRTQENQNLLPSILENNPFLGSLSQTHLLLPNTPESNYFPSPFCANELDGIYSNRCSEFDVSEIISAHTSATNPPIFDFDFSLDPLELGQNFRFNASRFSH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01135 334 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g01135 334 MobiDBLite consensus disorder prediction 65 83 - -
Aip05g01135 334 Pfam WRKY DNA -binding domain 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g01135 334 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 330 - -
Aip05g01135 334 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 330 IPR044810 GO:0003700
Aip05g01135 334 MobiDBLite consensus disorder prediction 65 96 - -
Aip05g01135 334 SUPERFAMILY WRKY DNA-binding domain 118 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g01135 334 Gene3D WRKY domain 103 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g01135 334 ProSiteProfiles WRKY domain profile. 120 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01135 Aip-Chr5 16289017 16290276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01135 7 318 WRKY Transcription Factor Family AT4G11070 35.535 1.09e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip05g01135 WRKY 9.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01135 - - adu:107488322 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01135 05 16289017 16290276 Aip03g03054 03 93850147 93852014 PCT