Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01125 ATGGAATACACTGGTCATAGTGAGAAATTCTGCATGGAGGATGAAAGCGATTGTGTTGGTGACGTAGTCAGTTCAGATGCTGATGAATTTGATGTTGAGCAATTGGATCCAAGTGGGCAGGATGACGTGTCGGATGGAGATGTATTTGGTCTTACCGCAGCTGAAATAGAGAACAAGGTTTTCAGAACAGAGGAGCGTGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGGTGTACGCAAGGGAGACTATGGGAAGGATGATGACGGAAATGTAATTAAGAGGAGATTCTTTTGCAACAGAGATGGGTTAAGGGATGAAAAGCACTATAATAGATTCGATAGAAAAAGATGTCATAAGCCTGAGACAGAAATGAACTGCCAGGCTAAGTTGTCGATATATCTTAACAAAGAAAGTTCGAACTGGAAGGTCCGGAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCAAAGTTCTATTGGGTGTCAGGTGCGGCAAAGGATCAGCTATTTGGTATGCAAAGTTATGGGCTACCTATGTCAAAGATACTTGGGTACATGGCAGGGATTGCCGGGGGGTATCCACTATTGGGTTTCACAAAGAAGGATGCTTATAACTACCTTGACCGGACTAAGCGCGCTAGGATCGTAGATGGGACGCAAATTCTGCCATTGTCTATTTGGAGGGAAAGGCTTCTGTGGACCCTGTAG 744 0.4422 MEYTGHSEKFCMEDESDCVGDVVSSDADEFDVEQLDPSGQDDVSDGDVFGLTAAEIENKVFRTEERAYEFYMRFGKCHGFGVRKGDYGKDDDGNVIKRRFFCNRDGLRDEKHYNRFDRKRCHKPETEMNCQAKLSIYLNKESSNWKVRKVILEHNHELVARCMVHLIPKFYWVSGAAKDQLFGMQSYGLPMSKILGYMAGIAGGYPLLGFTKKDAYNYLDRTKRARIVDGTQILPLSIWRERLLWTL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01125 247 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 164 - -
Aip05g01125 247 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Aip05g01125 247 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 53 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01125 Aip-Chr5 16223980 16224723 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01125 FAR1 4.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01125 - - ahf:112737376 395.201