Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01122 ATGGAACAGTTCCGGCACATTGGAGAGACTCTTGGGAGTTTGAAAGCGCTTATGGTATTGCGAGATGAAATTCAAATCAACCAACGGCAGTGCTGTTTGATCCTTGAAATGTTTAGCTTGGCGTTCGAGACGATTGCAGAGGAGATCAGGCAGAATCTGAAGCTGGAAGAGAGAAGCAGCAAATGGAAGCCTCTGGAGTTGCCTCTGAGAGAGCTTTGCAGGGTTTTCAAGGAAGCCGAGTTGTACATCCGGCAATGTTTGGATTCCAAGGAGTGGTGGGGGAAAGCCATCACCATGTCTAACAATTCTGACTGTGTTGAGTTCCATATCCACAATCTCCTTTGCTGTTTCCCGGCCGTGATCGAGGCCATTGAGAATGCAGGGGAGGCCTGTTGTCTTGATCAGACCGAGAAGGAGAAGAAGAAGGTCATGGTGTCAAGGAAATATGACATGGAATGGAATGATTCCAAGCTTTTCCAATGGAGATTTGGGAAGCAGTACTTGGTCTCTCGGGAGATCATCAGCCAGTTGGAGAATGCATGGAAGGAAGATAGGTGGAGGCTTATAGAATCACTCAAGGAGAAGAAAACTACGTCGAAGAAGAACGAGCAGCGCCTCGCCGAGATACTCTTGAAGAAGCTTGTAAATGGATCTGACAGCAAAACGAATCAAGATCTTTGGCCGATCCACGTTCTCGTGGGAGCCAAGGATTACCAAGTGAGGCGAAGATTGGGAAAGGGGAAGGAGTATAAGGAAGTGACTTGGCTTGGACAGAGTTTTGCATTGAGGTACTTCAATGGAGAGAAGCAAGCCTATGAAGGTGAGATTTCAAAATTGTTATGTCTTTCTCACCCCAACATATTGCAATACCTTTGTGGATTCTACGATGAGGAGAAGAAAGAGTTTAATCTTGTGATGGAGTTGATGAGCAAGGATTTGTGGACCTACATGAAGGAGAATAGCGGTCCAAGGAGGCAGATCTTGTTCTCAATTCCAGTTGTGGTGGATCTCATGCTTCAAATTGCAAGAGGCATGGAGTATCTCCACTCCAAGAAAATCTACCATGGAGATCTTAACCCTTACGGTGTTCTACTCAAAGCAAGGAACTCCCAAGAAGGTTACTTCCATGCAAAAGTCTCAGGATTTGGCCTTCCTTCCCTGAGGAACCGCGATCCAGCACAGAACCCCGAGGACCTGAACCCTAGCATATGGTATGCTCCGGAAGTACTGCACGAGATAGAAAAAGGAGGGAAGGTTTCTACCTCGTGCAAGTACTCGGAGAAAGCAGATGCATACAGCTTTGGAATGATTTGCTTTGAGTTGCTGACAGGGAAAGTCCCTTTCGAAGATAACCACCTGCAAGGGGAGAGAACCACACAGAACATCAAAGCAGGGGAGAGGCCTCTCTTCCCTGGTCGCTCCCCAAAATACCTTGTTAGCTTAATCAAGAAGTGTTGGCAAACCGATCCTTCACAGCGTCCTACTTTCTCTTCTATTTGTAGGATCTTGCGTTACACCAAGAAGTTCCTCTCCACCAGTACTGAGTACTATATCATTAATCCCGAACTTAACAACCTTGAGCTTCAATCTCCACCTGTTGATTGCTGCGATATAGAGACCACTTTCCTTAAGAATCTACCGGAGGAGATGGCGCCACATGTTTCCGCTGTTTCTCAAATCCCTTACCAGATCTATGCTTACAAGGTTGTGGAGAAAGGCAAGATCAGCCTCTTGAATTCAAGAGATAAAGGCAGCGAGACAGAGTTGCCAAAGGAAGATTCTCCTCAAGGAAGCGATGAATTCAGCTTCGCTTTTGAAGATGATCAAGTTTCCGCGGCTGAACCCTTTCAGTTTATAACTTCTCCCAAGTCAGTTCATGGCGGCGAAACACCGTCTTTTTTCTCCGAAGCACCGGCGAAGAAGACTGTTAGAATAAAGAGCCCAGTGCGAAAACTTGACAAGCTCAAGAAAGACCAAGGAGCGAAATCAATGCCGGCATCTCGCATTACTTTAAAGGCAAGTAAGGCATATCTGGCGTCACCGGCAGCTAGTCCATTGCACCCTGCACTCAGAAAAAAACCAACACAAGTCTCAGAGACAGAGCGCAACACTTCTAAGAACAACAAAGCTGTGACCACTACTCCTTCGACCCCAATAAGGAGAAGAAAATGCGAAGGGCAACACGTGCCAGAATTCATGGGAAGCCCGAGGGTGAAACCAAGGGATCAGTCACCATTAATGGCTAACAAGCTGAAGAAGACACCGCTGACAATGACCCCAGGAAGGATGATCACACGTACAAGCGACGCGCATTTGATACTGCAGAAGAGGCTCTTGATGGGTTCAAGCACAAGCAAAGGAGGAAGATGGGACCATGGAACTGAACACAGGACATCGCTGTCATCATTGGCATTGAGTCCTTTGAGTCCATATGTGATGAGAAGAAGAAGATCAACGGCGACAGCAGCAACATCATGTGGCCACGCCTCTGACTCAGAGAGCACTTGTTCTAAGCACAAAAGAGAGAGCATATCACCATTCGCAATGAGTCCTTTGAGCCCCTACGCTTCCAGAACAACAGCCTGTGGCCATGTCTCCGATTAA 2604 0.47 MEQFRHIGETLGSLKALMVLRDEIQINQRQCCLILEMFSLAFETIAEEIRQNLKLEERSSKWKPLELPLRELCRVFKEAELYIRQCLDSKEWWGKAITMSNNSDCVEFHIHNLLCCFPAVIEAIENAGEACCLDQTEKEKKKVMVSRKYDMEWNDSKLFQWRFGKQYLVSREIISQLENAWKEDRWRLIESLKEKKTTSKKNEQRLAEILLKKLVNGSDSKTNQDLWPIHVLVGAKDYQVRRRLGKGKEYKEVTWLGQSFALRYFNGEKQAYEGEISKLLCLSHPNILQYLCGFYDEEKKEFNLVMELMSKDLWTYMKENSGPRRQILFSIPVVVDLMLQIARGMEYLHSKKIYHGDLNPYGVLLKARNSQEGYFHAKVSGFGLPSLRNRDPAQNPEDLNPSIWYAPEVLHEIEKGGKVSTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGERTTQNIKAGERPLFPGRSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSTSTEYYIINPELNNLELQSPPVDCCDIETTFLKNLPEEMAPHVSAVSQIPYQIYAYKVVEKGKISLLNSRDKGSETELPKEDSPQGSDEFSFAFEDDQVSAAEPFQFITSPKSVHGGETPSFFSEAPAKKTVRIKSPVRKLDKLKKDQGAKSMPASRITLKASKAYLASPAASPLHPALRKKPTQVSETERNTSKNNKAVTTTPSTPIRRRKCEGQHVPEFMGSPRVKPRDQSPLMANKLKKTPLTMTPGRMITRTSDAHLILQKRLLMGSSTSKGGRWDHGTEHRTSLSSLALSPLSPYVMRRRRSTATAATSCGHASDSESTCSKHKRESISPFAMSPLSPYASRTTACGHVSD 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01122 867 Pfam Protein tyrosine and serine/threonine kinase 268 502 IPR001245 GO:0004672|GO:0006468
Aip05g01122 867 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Aip05g01122 867 SUPERFAMILY Protein kinase-like (PK-like) 230 512 IPR011009 -
Aip05g01122 867 MobiDBLite consensus disorder prediction 700 717 - -
Aip05g01122 867 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 674 - -
Aip05g01122 867 MobiDBLite consensus disorder prediction 581 601 - -
Aip05g01122 867 MobiDBLite consensus disorder prediction 682 717 - -
Aip05g01122 867 ProSiteProfiles Protein kinase domain profile. 238 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01122 867 MobiDBLite consensus disorder prediction 581 595 - -
Aip05g01122 867 Gene3D Transferase(Phosphotransferase) domain 1 230 525 - -
Aip05g01122 867 MobiDBLite consensus disorder prediction 819 851 - -
Aip05g01122 867 PANTHER SERINE-THREONINE PROTEIN KINASE 1 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01122 Aip-Chr5 16163780 16167394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01122 270 516 MAP Kinase Kinase Kinase AT1G14000 34.363 2.68e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Aip05g01122 PK_Tyr_Ser-Thr 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01122 - - cam:101509043 1010.75