Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01112 ATGGGCGGCAGCTGCAGCTCCACCGCCGCCAACGGCGCACCATCCTCCCAAGCTCACAATAACACTGCTGAAGCCAATCGACCCTCCAATGGCATCAACGTCCTTCATCCCCATTCCAACCCCACCCCACACAAACCCCCACCCCCTTCCTCCTCATCCGCCACCATCGGCCGGGTGTTGGGCCGCCCCATGGAGGACGTCCGCTCCTCCTACGTCTTCGGTAGGGAGCTGGGGCGGGGTCAATTCGGCGTGACTTACCTGGTGACTCACAAGACCACGCGCGAGCAGTTCGCGTGCAAGTCAATCGCCACGCGGAAGCTAGTGAACCGCGATGATATCGAGGACATCCGCCGGGAGGTGCAGATCATGCACCACCTCACCGGCCATCGCAACATCGTCGAGCTCAAGGCGGCCTACGAGGACCGCCACTCCGTCAACCTCATCATGGAGCTCTGCGCCGGCGGTGAGCTCTTCGACCGCATCATCGCCAAGGGACACTACTCGGAGCGCGCTGCCGCCAACCTCTGCCGCCAGATCGTGACGGTTGTCCACAACTGCCACTCCATGGGTGTGATGCACAGAGACCTCAAGCCCGAGAATTTCTTGTTCCTCAGTAAGGACGAGAATTCCCCTCTCAAAGCCACCGACTTTGGTCTCTCCGTCTTCTTCAAGCCAGGAGATGTGTTTAAAGACCTTGTTGGGAGCGCCTACTATGTTGCTCCGGAGGTTCTGCGTAGAAGTTATGGGCCTGAAGCTGATATTTGGAGTGCCGGCATTATCTTGTACATTCTGCTCTCGGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGGTATATTTGATGCTATTCTTCGTGGACGCATTGATTTCTCATCAGATCCTTGGCCTTCCATATCGAGCAGTGCCAAAGATCTGGTCAAGAAGATGTTACGTGCTGACGCCAAGGAACGGCTTTCAGCAGTTGAAGTCCTTAACCATCCTTGGATGAGAGAAGATGGAGCATCTGATAAGCCTCTTGATATTGCTGTTTTGAGCAGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTTTGAAGGTTATTGCTGAAAGTCTTTCTGAAGAAGAAATCATTGGCTTGAAAGAGATGTTCAAAAGTATGGACACAGATAACAGTGGAACAATAACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTCGGTACCAAGCTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAAGATCACCTATATAAGGCCTTTGAATATTTTGACAAGGATAAAAGCGGGTACATCACAATGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAAATTATTGCCGAAGTTGACACAGACCATGTAATCTTCTCCTCTCTTGTTTATTTAATTTATATTTACCAGATGTATTAA 1533 0.4964 MGGSCSSTAANGAPSSQAHNNTAEANRPSNGINVLHPHSNPTPHKPPPPSSSSATIGRVLGRPMEDVRSSYVFGRELGRGQFGVTYLVTHKTTREQFACKSIATRKLVNRDDIEDIRREVQIMHHLTGHRNIVELKAAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHNCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGIILYILLSGVPPFWAENEQGIFDAILRGRIDFSSDPWPSISSSAKDLVKKMLRADAKERLSAVEVLNHPWMREDGASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAESLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDHVIFSSLVYLIYIYQMY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01112 510 MobiDBLite consensus disorder prediction 1 57 - -
Aip05g01112 510 Pfam EF-hand domain 448 474 IPR002048 GO:0005509
Aip05g01112 510 MobiDBLite consensus disorder prediction 1 37 - -
Aip05g01112 510 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 38 494 - -
Aip05g01112 510 CDD STKc_CAMK 71 328 - -
Aip05g01112 510 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Aip05g01112 510 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Aip05g01112 510 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Aip05g01112 510 Pfam Protein kinase domain 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01112 510 CDD EFh 376 435 IPR002048 GO:0005509
Aip05g01112 510 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Aip05g01112 510 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Aip05g01112 510 CDD EFh 450 494 IPR002048 GO:0005509
Aip05g01112 510 SUPERFAMILY EF-hand 368 494 IPR011992 -
Aip05g01112 510 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Aip05g01112 510 SMART efh_1 447 475 IPR002048 GO:0005509
Aip05g01112 510 SMART efh_1 375 403 IPR002048 GO:0005509
Aip05g01112 510 SMART efh_1 411 439 IPR002048 GO:0005509
Aip05g01112 510 Pfam EF-hand domain pair 376 436 IPR002048 GO:0005509
Aip05g01112 510 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Aip05g01112 510 Gene3D Transferase(Phosphotransferase) domain 1 157 347 - -
Aip05g01112 510 SUPERFAMILY Protein kinase-like (PK-like) 68 340 IPR011009 -
Aip05g01112 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Aip05g01112 510 ProSiteProfiles Protein kinase domain profile. 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01112 510 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Aip05g01112 510 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01112 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 494 - -
Aip05g01112 510 Gene3D - 348 437 - -
Aip05g01112 510 Gene3D - 354 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01112 Aip-Chr5 16049037 16052503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01112 57 493 EF-hand Containing Proteins AT4G23650 82.648 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip05g01112 Pkinase 7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01112 K13412 - gmx:100777096 844.728