Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01111 ATGGAACAGAAAAGCTTGTTGATATCGGCGCTGAGTGTTGGGGTTGGAGTGGGAGTTGGGATAGGCTTAGCTTCTGGACAAAGCCTTGGTAGCACATGGGGTGCAACTTCTTCTTCTTCTTCAAACTTAAACGCCATTACTCCCATGAAATTGGAGCAGGAAATGCTTAAACTCGTGCTTGATGGCAGAGACAGCAACATTACTTTTGATAACTTCCCTTATTATCTCAGTGAGCAGACAAAGGTTTTGTTGATAAGTGCCGCTTATGTTCATTTAAAGCATGCTGATATTTCCAAATATACGCGCAATCTTGCTCCTGCAAGCCGAACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAGCAGGTTTATGCCAAGGCTTTGGCTCACTACTTTAAGGCCAAGTTGCTTCTCTTGGATTTAACTGACTTTTCGTTGAAGGTTAGTTTTAAAATTGAAAGTTTTGGCTTCATGGTGTTCTGTTTTCTTTGTTTTGGATTGCAGTCCTTCAAAAGATCTACTTCAGAGTCCACTCTGGAGCGGTTATCTGACATGTTTGGATCATTTTCAATCTTTTCACAGAGGGAGGAGCCTAAGGGCAAAATACAGAGGCAAAGCAGTGGAATGGACCTCCGATCAATGGGGGCCGAAGGATCTTGTAATCCTCCTAAGATTCGTCGAAATGTGTCTGCCTCCGCAAATATTAGTAGCCTTGCCTTGCAAAGCAATTCTACAAATTCAGCTCCTCTGAAGCGCACAACCAGCTGGTCTTTTGATGAGAAGCTTCTTATACAGACCCTTTACAAGGTAATGTTACTTTTGGTTGGATACAATTTCCAAATTAAACAAAGCTCGACTTCATATCCACCATTTCACTTGCAGGTTCTGCTTTTTGTGTCAAAAACCAATCCCATTGTGCTATATCTGCGGGATGTTGACAAGTTGCTACATAGATCAACAAGGATTTTTAACCTGTTCCAGAAAATGTTGAGTAAATTATCTGGACCAATTCTGATTCTTGGTTCACGAGTTTTGGATGCTGATAACGACTACCAAGAGGTAGATGACAGACTTAGTTTGCTGTTCCCTTACAATCTAGTAATCAGACCCCCAGAAGATGAATCGCATCTCGTCAGCTGGAAGAGTCGGTTTGAAGAGGACATGAAGATGATACAGGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGACTCTGTCTGTGTGGCGGACACAATGGTTCTCAGCAACTATATAGAAGAGATTGTTGTGTCTGCAATTTCATATCATTTAATGAATAACAAAGATCCTGAATACAGAAATGGGAAACTTGTTATTCCATGCAATAGTTTGTCCCGTGCATTGAGTATATTCCAGGAAGGGAAATTCAGTGAAAAAGATACGTTAAAATTAGAAGCTCAGGCAGTAAAATCTGAGAAAAAGGAAGAACCTGCTATGAAACGAGAAGCAAAGTCTGAAAATCCTGCTCCGGTTAAGAAGGCTGAAGCAGAAATATCAACTTCAGTGGTAAAGGCTGAGGGTGAAAACTCAGCTCCAGCTCCCAAAGTTGAAGTTCCTCCTGATAATGAATTCGAGAAGCGAATAAGACCTGCGGTAATACCAGCAAATGAAATTGGTGTGACATTCTCAGATATTGGTGCCTTAGATGAGACCAAGGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGATCTCTTCAAAGGAGGCCTTCTAAAGCCCTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACCGGAAAGACAATGCTGGCAAAGGCCATCGCGAACGAGGCCGGGGCAAGTTTCATAAACGTGTCCATGTCTACCATCACTTCCAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACGCTGGCAGCCAAGGTCTCGCCAACAATCATATTTGTTGATGAGGTTGACAGCATGCTTGGGCAACGGAGCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATCAAGAATGAGTTTATGACTCACTGGGATGGACTAATGACAAAACCAGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGGAGATTTGAAAGAAGAATTATGGTAGGGCTACCATCTGTGGAGAATAGGGGAAAAATTTTGAAGACACTTCTGGCAAAAGAGAAGGTGGACGAGGATCTTGATTTGAAGGAACTTGCAACTATGACGGAAGGATACAGTGGCAGTGACTTGAAGAACTTGTGCATAACTGCTGCTTATAGGCCTGTTAGAGAGTTGATTCAACAAGAGAGACTAAAGACTCTGGAAAAGCAGAAAGGTAGCCAAGGAGATAGTACGGATACAGAAGATGAAGTTAAGCAGAAAAGGGTTATTAAACTTAGGCCCTTGAATATGCAGGACTTGAAAGAGGCAAAGAATCAAGTAAGACTGTGTTATAATTTTATTAGATTTAATGAATTAATGTGGAGTAAAATATTT 2550 0.4208 MEQKSLLISALSVGVGVGVGIGLASGQSLGSTWGATSSSSSNLNAITPMKLEQEMLKLVLDGRDSNITFDNFPYYLSEQTKVLLISAAYVHLKHADISKYTRNLAPASRTILLSGPAELYQQVYAKALAHYFKAKLLLLDLTDFSLKVSFKIESFGFMVFCFLCFGLQSFKRSTSESTLERLSDMFGSFSIFSQREEPKGKIQRQSSGMDLRSMGAEGSCNPPKIRRNVSASANISSLALQSNSTNSAPLKRTTSWSFDEKLLIQTLYKVMLLLVGYNFQIKQSSTSYPPFHLQVLLFVSKTNPIVLYLRDVDKLLHRSTRIFNLFQKMLSKLSGPILILGSRVLDADNDYQEVDDRLSLLFPYNLVIRPPEDESHLVSWKSRFEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSVCVADTMVLSNYIEEIVVSAISYHLMNNKDPEYRNGKLVIPCNSLSRALSIFQEGKFSEKDTLKLEAQAVKSEKKEEPAMKREAKSENPAPVKKAEAEISTSVVKAEGENSAPAPKVEVPPDNEFEKRIRPAVIPANEIGVTFSDIGALDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRSRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENRGKILKTLLAKEKVDEDLDLKELATMTEGYSGSDLKNLCITAAYRPVRELIQQERLKTLEKQKGSQGDSTDTEDEVKQKRVIKLRPLNMQDLKEAKNQVRLCYNFIRFNELMWSKIF 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01111 850 CDD AAA 595 728 - -
Aip05g01111 850 ProSitePatterns AAA-protein family signature. 700 719 IPR003960 GO:0005524|GO:0016887
Aip05g01111 850 MobiDBLite consensus disorder prediction 485 508 - -
Aip05g01111 850 Gene3D - 556 728 IPR027417 -
Aip05g01111 850 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 273 - -
Aip05g01111 850 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 294 835 - -
Aip05g01111 850 Pfam AAA+ lid domain 750 792 IPR041569 -
Aip05g01111 850 MobiDBLite consensus disorder prediction 485 513 - -
Aip05g01111 850 SMART AAA_5 593 730 IPR003593 -
Aip05g01111 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 796 IPR027417 -
Aip05g01111 850 MobiDBLite consensus disorder prediction 791 810 - -
Aip05g01111 850 Pfam ATPase family associated with various cellular activities (AAA) 597 727 IPR003959 GO:0005524|GO:0016887
Aip05g01111 850 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 273 - -
Aip05g01111 850 Gene3D - 729 801 - -
Aip05g01111 850 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 294 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01111 Aip-Chr5 16043798 16047726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01111 557 840 Calmodulin-binding Proteins AT3G56690 35.274 3.16e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01111 - - aip:107643102 1307.35