Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01102 ATGTGTTCGGATTTTGGAGATGTTGAGGGTTTAACTATTGAAGATATTATGCAAAAGACCTTTAGAACTGATGATGATGCATATGAGTTCTACAAAAACTTTAGTAGATTGGATAGGAGGTGGGTACATAAACCTGAGACGAGAACAAATTGTAAGGCGAAGTTTTCCGTTCACCTAGATAAGAATGCTTCCATATGGCAAGTAAGGAAGATCAACAACAACCACAACCATGAACTGACTCCCTATGTAATGGTGCACCTAATCCCAAAGTATAGGTCATTGACTGAAGGTGCGAAAGCGCAAATAGATGGATTGCGTGAGTGCGGGATATCGACGGCAAAAACAATGCGATATATGGCAGGATTGGCAGGTGGGTATTTATTGGTAGGATTTCTAAAGGACGCGTACAATTATATTGACAAGCAAAGGTGTGAGCAAATTGTTGACGGAGATGTTGAATCTACGATAGCCTATTTAGAAGGAAAGGCAAAGGCTGATTCTATGCTGATGGCACAGTATAATTTGACCAAGGACAGAATGCTTGCAAATATGTTTTGGGCCGACGGGGGAAAACAATCGAAGGTGAAATCGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAACACATAAAAAACAAGTGGTGTAACAGAAAAACTAACGCCGGTTATTGGGAGATCACCGGAAAAGAGCGGATCGTCAAAGGAACAGGGACAGACAATGTGATAGGTACAAAAAGAACACTAGTTTTCTACAAGCGTCCACATAGTGTCAAAACCAATTGGGTTCTTCATGAATATCATGCACTTGATCAAAAGAGCAACATCGTGTTGAGCCGTGTAATAAAGAATGTTGAGAAAAGGGAAAAGAAGGTTAAGAGAAAAGCAAGCAACATAATCGAAGAGGAAGTAACATGTGAACCATGCAGCGAAATGACTGGCTATGTTACCGAAGCAACTACAGAAGATGCAATAATTCCTGATGCATGTGTTTCATCCGAACCGCAACCACCTCAAGATATTGACTATGAAATTCTTTCGCCGGGACAACAATCTTCGGTGGCCCATTCCGGTAATGGAAGCAACAATGCTCCGTTGCTTCCATTTGAAGGTATGTGGAAGCAAGATGCCGAGATGAACACGGAGTGTTTTTGA 1155 0.4104 MCSDFGDVEGLTIEDIMQKTFRTDDDAYEFYKNFSRLDRRWVHKPETRTNCKAKFSVHLDKNASIWQVRKINNNHNHELTPYVMVHLIPKYRSLTEGAKAQIDGLRECGISTAKTMRYMAGLAGGYLLVGFLKDAYNYIDKQRCEQIVDGDVESTIAYLEGKAKADSMLMAQYNLTKDRMLANMFWADGGKQSKVKSDDQEWFFFNELKHIKNKWCNRKTNAGYWEITGKERIVKGTGTDNVIGTKRTLVFYKRPHSVKTNWVLHEYHALDQKSNIVLSRVIKNVEKREKKVKRKASNIIEEEVTCEPCSEMTGYVTEATTEDAIIPDACVSSEPQPPQDIDYEILSPGQQSSVAHSGNGSNNAPLLPFEGMWKQDAEMNTECF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01102 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 199 313 - -
Aip05g01102 384 SUPERFAMILY NAC domain 195 282 IPR036093 GO:0003677|GO:0006355
Aip05g01102 384 MobiDBLite consensus disorder prediction 349 364 - -
Aip05g01102 384 Pfam FAR1 DNA-binding domain 38 80 IPR004330 -
Aip05g01102 384 Gene3D NAC domain 151 290 IPR036093 GO:0003677|GO:0006355
Aip05g01102 384 MobiDBLite consensus disorder prediction 349 368 - -
Aip05g01102 384 Pfam No apical meristem (NAM) protein 194 268 IPR003441 GO:0003677|GO:0006355
Aip05g01102 384 Coils Coil 282 302 - -
Aip05g01102 384 ProSiteProfiles NAC domain profile. 141 284 IPR003441 GO:0003677|GO:0006355
Aip05g01102 384 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 199 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01102 Aip-Chr5 15800117 15803794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01102 193 273 NAC Transcription Factor Family AT1G33060 45.882 5.90e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g01102 NAM 7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01102 - - aip:107615767 321.242