Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01098 ATGGCGAAGGAACTTGAGAACAAAGCCAAAGAGGCATTCTTGGATGACGATTTTGCCCTCGCCGCCGATTACTACTCGGAAGCCATCAACTTAGATCCCAACAACCCTCTTCTTTATGCCGACAGAGCCCAAGCCCATATCAAGCTCCAGAACTTCACAGAAGCCGTTTCTGATGCGAACAAAGCCATTCAATTGAGTCCTTCACTGGCTAAGGCATACCTTCGTAAGGGAACTGCGTGCATTAAGCTGGAAGAGTATCAAACTGCAAAGGTAGCACTTCAAACCGGTGCCTCTTTTGCTCCCGACGATTCCAGATTCACCAAGCTCATTCAAGATTGTGATCGCTACATTGCAGAAGAATCGAATGATCTTGCTAGCACCTTATTGCCCCGCGTCCCCACAACTCCTGCCGGTAATGGTTCGCATTCGACTGATAGAAGTATAGATTCTACTAAAGAAGCTGAAAGAGACAGTTCGGTACCCCAAATCAATGAAGTTGCAACAACCAGGCCAAAATTCAGACATGAATACTACCAGAGGCCAGAAGAAGTGGTTGTGACGATATTTGCTAAAGGCATACCAGCAGACGACGTAATTGTTGACTTTGGTGAACAGATTATGAGTGTTACTATTGCTGTTCCCGGACAAGAACCCTATCGTTATCAACAACGATTGTTCGGAAAGATAGTACCCGATAAGTGCAGAGTCCTGGTGTTGTCAACTAAAGTTGAAATCCGCCTTGCAAAAGCTGAAGCTCTTAATTGGACATCTCTGGAATATAGCAAGCATGTGCTTCCTCAGAAAATAAATGCGTTGACAAATCAACCTGAAAGGCCAACATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCACTGATGAAAAAAGAGGAGAAAGAAGAGAAGCTAGACGGTGATGCTGCTTTGAACAAATTGTTCCGAGATATTTACCAAAATGCAGATGAGGACATGAGAAGAGCTATGAGCAAGTCATTTTTGGAGTCAAATGGAACAGTGCTGTCAACTGACTGGAAAGAAGTAGGATCAAAGAAGGTGGAGAGCAGTCCCCCTGAAGGCCTGGAGTTGAAGAAATGGGAATATTGA 1116 0.4444 MAKELENKAKEAFLDDDFALAADYYSEAINLDPNNPLLYADRAQAHIKLQNFTEAVSDANKAIQLSPSLAKAYLRKGTACIKLEEYQTAKVALQTGASFAPDDSRFTKLIQDCDRYIAEESNDLASTLLPRVPTTPAGNGSHSTDRSIDSTKEAERDSSVPQINEVATTRPKFRHEYYQRPEEVVVTIFAKGIPADDVIVDFGEQIMSVTIAVPGQEPYRYQQRLFGKIVPDKCRVLVLSTKVEIRLAKAEALNWTSLEYSKHVLPQKINALTNQPERPTYPSSKPRTKDWDKLEALMKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVESSPPEGLELKKWEY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01098 371 Pfam SGS domain 289 369 IPR007699 -
Aip05g01098 371 MobiDBLite consensus disorder prediction 127 145 - -
Aip05g01098 371 ProSiteProfiles SGS domain profile. 280 371 IPR007699 -
Aip05g01098 371 MobiDBLite consensus disorder prediction 348 371 - -
Aip05g01098 371 Pfam CS domain 174 249 IPR007052 -
Aip05g01098 371 Pfam Tetratricopeptide repeat 70 102 IPR019734 GO:0005515
Aip05g01098 371 Pfam Tetratricopeptide repeat 39 68 IPR019734 GO:0005515
Aip05g01098 371 CDD p23_CS_SGT1_like 176 259 - -
Aip05g01098 371 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Aip05g01098 371 SUPERFAMILY TPR-like 2 113 IPR011990 GO:0005515
Aip05g01098 371 ProSiteProfiles CS domain profile. 170 259 IPR007052 -
Aip05g01098 371 MobiDBLite consensus disorder prediction 350 371 - -
Aip05g01098 371 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Aip05g01098 371 SUPERFAMILY HSP20-like chaperones 167 265 IPR008978 -
Aip05g01098 371 SMART tpr_5 36 69 IPR019734 GO:0005515
Aip05g01098 371 SMART tpr_5 70 103 IPR019734 GO:0005515
Aip05g01098 371 SMART tpr_5 2 35 IPR019734 GO:0005515
Aip05g01098 371 Gene3D Tetratricopeptide repeat domain 1 127 IPR011990 GO:0005515
Aip05g01098 371 PANTHER PROTEIN SGT1 HOMOLOG 1 371 IPR044563 GO:0051087
Aip05g01098 371 MobiDBLite consensus disorder prediction 127 166 - -
Aip05g01098 371 PANTHER PROTEIN SGT1 HOMOLOG A 1 371 - -
Aip05g01098 371 Gene3D - 171 262 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01098 Aip-Chr5 15708321 15712406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01098 1 94 U-box Gene Family AT3G07370 35.106 7.54e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01098 K12795 - gmx:100784022 514.227