Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01096 ATGGACTGGGATTTGCACGCTATAGTGAGAGGATGCACCAATACTCATCAATCCGACAACATCCTAGGCGATCTTAACTATTTCCAGTTAAGTCCTCAACAAGAAATAGATGAACGTTTCTTCAAGTCTCACCAATTCTCAGAAACAGAAACCATCACTACTGCCATCGTTGATGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCTTCTACAACTAGTTCCCACCCTACCTCCGCTGAAGTCAACAAAGTACTCCATCTCAAACCTTCAGATCCAACACCATCTAAATGTAAAAGAAGGAAGAAGAATGAAGAGAAGAATAAGAGGGTAGTGAAGCGGGTGAGAGAAGAAGAAGGGTACAGTGATGGATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGATCAGAGTATCCGCGGAGCTATTACAGGTGTAGCAGCTGCAAAGGATGCTTGGCTAGGAAACAAGTTGAACGGAGCCATTCCGATCCACAAGTTTTCATAGTTACCTACACAGCTGAACACACCCATCCTCCTCACCCCATCACTACTATTCCAACAAACTCACAAGCACAAGGAACAGTAGTAGGAAGAGGCTGGAAGAGGAGAACCAATCTATAG 627 0.4402 MDWDLHAIVRGCTNTHQSDNILGDLNYFQLSPQQEIDERFFKSHQFSETETITTAIVDDELEELYKPFYPSTTSSHPTSAEVNKVLHLKPSDPTPSKCKRRKKNEEKNKRVVKRVREEEGYSDGWAWRKYGQKPIKGSEYPRSYYRCSSCKGCLARKQVERSHSDPQVFIVTYTAEHTHPPHPITTIPTNSQAQGTVVGRGWKRRTNL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01096 208 MobiDBLite consensus disorder prediction 180 208 - -
Aip05g01096 208 MobiDBLite consensus disorder prediction 72 109 - -
Aip05g01096 208 Gene3D WRKY domain 104 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g01096 208 SMART WRKY_cls 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g01096 208 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 2 183 - -
Aip05g01096 208 ProSiteProfiles WRKY domain profile. 116 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g01096 208 SUPERFAMILY WRKY DNA-binding domain 117 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g01096 208 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 183 IPR044810 GO:0003700
Aip05g01096 208 Pfam WRKY DNA -binding domain 123 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g01096 208 MobiDBLite consensus disorder prediction 183 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01096 Aip-Chr5 15697225 15697944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01096 2 180 WRKY Transcription Factor Family AT4G01250 41.919 4.51e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip05g01096 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01096 K13426 K13425 gmx:102667019 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01096 05 15697225 15697944 Aip03g03118 03 99086725 99088037 PCT