Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01091 ATGAATGCATTTGTAGAGGGAGTATGCTACGTGAAGAAGGACTTCAATCTTGCGAAGCACCCTGAGATCGATGTGCCTAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAATCCAAGGAAGCACTGGGAATTGGTGGACTTCCAAAGGGACGTGTTATGGAAATATATGGTCCAGAGGCTTCTGGAAAAACAACTCTTACTTTACATGTGATTTCAGAGGCACAGAAGCAAGGAGGCTACTGTGTATTTGTTGATGCTGAGCATGCTCTCGATAAGACACTTGCAGAATCCATTGGTGTGAATACTGGAAACTTGTTGCTTTCACAACCAAATTGTGGTGAACAAGCACTTAGTCTTGTGGATACCTTAatcaGGTGCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGCGGTTTTGGAGGTGGTGCTCCAACAAGCTCAAACGCTCCTTAAATGCTTTTGACATTTGTCCTTTTTTGCTGTTAGATGGCAATAGTCAGTTGCCAGTTTCTAGGGAATATCCACTATTCTAA 537 0.4432 MNAFVEGVCYVKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEALGIGGLPKGRVMEIYGPEASGKTTLTLHVISEAQKQGGYCVFVDAEHALDKTLAESIGVNTGNLLLSQPNCGEQALSLVDTLIRCWWKAWLWSGCWRFWRWCSNKLKRSLNAFDICPFLLLDGNSQLPVSREYPLF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01091 178 Gene3D - 1 42 IPR036388 -
Aip05g01091 178 Gene3D - 43 152 IPR027417 -
Aip05g01091 178 Pfam recA bacterial DNA recombination protein 36 126 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip05g01091 178 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 35 127 - -
Aip05g01091 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 160 IPR027417 -
Aip05g01091 178 PANTHER RECA 35 127 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aip05g01091 178 Pfam Plectin/S10 domain 4 42 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01091 Aip-Chr5 15662219 15665955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01091 4 41 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 89.474 3.12e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01091 K03553 - aip:107640239 248.825