Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01090 ATGGCGAGGAAAGAGAAAGAGTCAATTGGAAGTGCCGGTGCCGATGAGGGTAACATTACGGGGGTTCGCACTCACGGAGGTCGCTACGTCAAGTACAATCTGTACGGAAAATTCTTCGAACTTCCCGCCAAATATGTACCTCCTATTCGCCCCATTGGTCGAGGCGCTTATGGCCTCGTCTGTGCTGCTGTTGATTCAGAGACTCGGGAAGAAGTTGCCATCAAGAAGATTGCTGATGCCTTTGACAGTCTTACCAATGCCAAGAGGACTTTGAGGGAGATTCTTCTTCTTCGCCACATGGACCACGAAAATATCATCGCCATTAAGGATATCATTCGACCTCCTAAGAAGGACACCTTCAACGATATCTACATTGTCTCTGACTTGATGGACATTGATCTGTACCACGTTCTTCGTTCTGATCAACCTCTTAACCATGACCACTCTCAGTACTTTTTATACCAGCTCTTACGGGGACTGAAATATGTGCATTCCGCTAATGTCTTGCATCGTGATCTTAAGCCTAGTAATATACTTCTCAATGCAAATTGTGACCTTAAAATTGCAGACTTTGGCCTCGCAAGGACAACATCCGAAACCGATTTCATGACTGAATATGTTGTCACCCGATGGTACCGTGCCCCTGAATTACTCCTTAACTGTTCTGATTACACTGCCGCAATTGATGTGTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACTAGAGAACCTTTGTTCCCCGGGAAAGATTATGTTCATCAATTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAAAAGGTATGTTAGACAGCTTCCGCAATGTAGGAAGCAAAAATTCTCTGCCAGATTCCCTAATATGTCTGCGGATGCATTGGACTTGCTAGAAAAAATGCTTATATTTGATCCCCACAAACGCATCACAGTTGATGAGGCACTTAGTCACCCATATCTTTCATCACTTCATGACATAAATGATGAGCCAGTTGGTCCTAGGCCATTCAGCTTTGATTTTGAGCACCCATCATACACCGTAGAGCACATGAAGGAGCTTATATGGAGGGAAGCAGTGAAGTTCAATCCAGATCCTCCAGGTCCTTAG 1143 0.4427 MARKEKESIGSAGADEGNITGVRTHGGRYVKYNLYGKFFELPAKYVPPIRPIGRGAYGLVCAAVDSETREEVAIKKIADAFDSLTNAKRTLREILLLRHMDHENIIAIKDIIRPPKKDTFNDIYIVSDLMDIDLYHVLRSDQPLNHDHSQYFLYQLLRGLKYVHSANVLHRDLKPSNILLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSDYTAAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVRQLPQCRKQKFSARFPNMSADALDLLEKMLIFDPHKRITVDEALSHPYLSSLHDINDEPVGPRPFSFDFEHPSYTVEHMKELIWREAVKFNPDPPGP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01090 380 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Aip05g01090 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Aip05g01090 380 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01090 380 Gene3D Transferase(Phosphotransferase) domain 1 130 359 - -
Aip05g01090 380 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01090 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Aip05g01090 380 SMART serkin_6 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01090 380 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip05g01090 380 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
Aip05g01090 380 Gene3D Phosphorylase Kinase; domain 1 29 369 - -
Aip05g01090 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01090 Aip-Chr5 15659578 15662035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01090 7 375 MAP Kinase Gene Family AT4G01370 75.610 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip05g01090 Pkinase 2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01090 - - egr:104443843 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01090 05 15659578 15662035 Aip03g03147 03 101045101 101047158 PCT