Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01076 ATGGTGGTTCAGCTCTTTAAGTCCAACATGTACTTGAATTCTATCAATATTCAAAGCACCTACTATGTGTCCACATGTTACTTCAATCCAAACCTTCCTGAGGTTATTGACTTCAAGAAAAGATTGGCAACGGATTTTGTTCCCTGTTCACAACGAATTAGTCAGCTGGAAGCTCAACCTCAATACTCAGTCACAGATGAGATCAATGCCGGCATTGTACCAGTGCACACTATAGAAGAGGTTCTTAATATGACTGAGGTGAGATTGCAATCTGATAACTTAGGCCAGGTTGGTAAAGATGATTGGTCCTATATGTCATGTAAGACATGTCCTAAGAAGGTTGTGCAGAGCAAAGATAGGTATTGGTGTGATAATTGTAGGCGTGTAGGCTTCAAGGTTATGCTAAGGTATAGGCTCCAAGTAATTGTGACTGATGGAAGTGGTTGTCTGAACCTCCTTGTGTAG 465 0.4108 MVVQLFKSNMYLNSINIQSTYYVSTCYFNPNLPEVIDFKKRLATDFVPCSQRISQLEAQPQYSVTDEINAGIVPVHTIEEVLNMTEVRLQSDNLGQVGKDDWSYMSCKTCPKKVVQSKDRYWCDNCRRVGFKVMLRYRLQVIVTDGSGCLNLLV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01076 154 Gene3D - 76 154 IPR012340 -
Aip05g01076 154 Pfam Replication factor-A C terminal domain 96 148 IPR013955 -
Aip05g01076 154 SUPERFAMILY Nucleic acid-binding proteins 96 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01076 Aip-Chr5 15469410 15470185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01076 104 148 Core DNA Replication Machinery Family AT5G61000 50.000 1.20e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01076 - - adu:107463979 271.552