Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01067 ATGGATGGGCGAGAAGCAATGTCATTCTCTGGCGGCTCTGCCTCATTCTACATACATAGAGGAGGTGGAGGAGGAGGAGGAGGAGGTGTTGGTGGTTCTCGAACACCAACACAGCCACAACCCGGAGGCTTCCAAGGACCTCCTGGGTTCCGGGCTCTCTCAAACGTTAGAGGTGCTGGTGGCCCTGGTCCTGCTGCTTCTGCATTCTCACCAGAGCCTCAGCATCCTAATTTTGGCCATGGAATCAGCATAGGTTCCTCCTCCCCTGGTGGAGGTGCTGGTGCTGGTTCTGGTGCTGGTGCTGGTGCTGGTGGAGGTGGAGGTGGAGGAGGTGGTGGTGGAGGTGGTAGTGGTGCACCTCCTTCGTCTTCAGGGGAGCCTGTAAAGAAGAAAAGAGGGAGGCCAAGAAAGTATGGTCCTGGTGGACCTGTTTCTTTGAGGCTCTCTGCCACTGCTAATTCCTCTCCTGGCTCCGGTACTCCCTTGGAAAAGAAGCGGCGCGGACGCCCCCCTGGAAGTGGAAGGAAGCAACAGCTAGCTTCTCTAGGTGAATGGATGAATAGTTCTGCAGGGATGGCCTTCTCACCTCATGTTATAAGTGTTGAACCTGGGGAGGACATTGTAGCAAAGTTATTGTCATTTGCACAGCAGAGACCAAGGGCTGTATGCATCATGTCTGGTACTGGGATAGTTTCTTCAGTCACTATGCGTCAACCTGCTTCTAATACTGTCAGTGTTACTTATGAGGGACGATTTCAAATTTTATGCTTGTCTGGTTCTTATTTGGTTGCGGACGATGGTGGAGCTCGTAGTAGAACAGGCGGCATCAGTGTTTCCCTTTCTAGTCCTGAGGGGCATGTTATTGGTGGTGGCGTTGCTGTGCTTATTGCCGCAACCCCAGTGCAGGTGGTAGTATGCAGTTTTGTATACGGTGGCAGCTCTAAGGCAAAGCCTAAGCAAGTGACAAGCACAAAAGATAGTGGTTCGGAGCCTCAAAGTAGCGACAAGTTAGCTTCTCCGGCAAGTGCACCTCCTCCTAATCAAAACTACAACTCATCTTCATCCGCGGTAGCCATTTGGCCTGGTTCGCAGCCGGCTGATCTTAAAAGTGCACATCCACACACTGGTATTGACCTGACTCGTGGATGA 1149 0.5213 MDGREAMSFSGGSASFYIHRGGGGGGGGGVGGSRTPTQPQPGGFQGPPGFRALSNVRGAGGPGPAASAFSPEPQHPNFGHGISIGSSSPGGGAGAGSGAGAGAGGGGGGGGGGGGGSGAPPSSSGEPVKKKRGRPRKYGPGGPVSLRLSATANSSPGSGTPLEKKRRGRPPGSGRKQQLASLGEWMNSSAGMAFSPHVISVEPGEDIVAKLLSFAQQRPRAVCIMSGTGIVSSVTMRQPASNTVSVTYEGRFQILCLSGSYLVADDGGARSRTGGISVSLSSPEGHVIGGGVAVLIAATPVQVVVCSFVYGGSSKAKPKQVTSTKDSGSEPQSSDKLASPASAPPPNQNYNSSSSAVAIWPGSQPADLKSAHPHTGIDLTRG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01067 382 CDD DUF296 196 308 IPR005175 -
Aip05g01067 382 MobiDBLite consensus disorder prediction 1 179 - -
Aip05g01067 382 Gene3D - 196 326 - -
Aip05g01067 382 Pfam Plants and Prokaryotes Conserved (PCC) domain 196 309 IPR005175 -
Aip05g01067 382 ProSiteProfiles PPC domain profile profile. 189 330 IPR005175 -
Aip05g01067 382 MobiDBLite consensus disorder prediction 313 382 - -
Aip05g01067 382 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 382 - -
Aip05g01067 382 MobiDBLite consensus disorder prediction 316 360 - -
Aip05g01067 382 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 382 IPR039605 GO:0003680
Aip05g01067 382 SUPERFAMILY AF0104/ALDC/Ptd012-like 193 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01067 Aip-Chr5 15226358 15229578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01067 1 382 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.677 2.40e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01067 - - aip:107643074 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01067 05 15226358 15229578 Aip05g01067 05 15226358 15229578 ECH
Aip05g01067 05 15226358 15229578 Aip03g03214 03 104894448 104896260 PCT