Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01061 ATGAAGAAGCTATGCACTTCATTGTTGTTGTTGTTTCTGGGTTTGGTTTCCACGTTTGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCATTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGTGCAGCAACGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGATTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTTGTGGACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTCGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGTTTGCATTATCTTCCAAGGTATTCTTCTGATACCATTGTCATCTTGGTTGGTTGGTTTTCTACTCCGCCATCATATTTAACAAAAATATGTTTTCTGTCAATCAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGACTCAAAGCAGCGGCCCTCTATTCAATGTGCCGGTGCATCACCCGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGATTGGTTCTCTCTTTCTGATTGCTCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGAGCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCAGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAGTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCACGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTCGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTCGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGGCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTTGCACTCTTATCATAA 2076 0.4268 MKKLCTSLLLLFLGLVSTFALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILCSNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVDMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGMYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPRYSSDTIVILVGWFSTPPSYLTKICFLSISLYFQGNCLQIQNKDSKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMIGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCGMLESRIDTSTSVELKSSSLAWAELALLS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01061 691 ProSiteProfiles Protein kinase domain profile. 392 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01061 691 SUPERFAMILY L domain-like 28 238 - -
Aip05g01061 691 Pfam Protein tyrosine and serine/threonine kinase 396 663 IPR001245 GO:0004672|GO:0006468
Aip05g01061 691 SUPERFAMILY Protein kinase-like (PK-like) 368 666 IPR011009 -
Aip05g01061 691 Gene3D Ribonuclease Inhibitor 143 295 IPR032675 -
Aip05g01061 691 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Aip05g01061 691 PANTHER PROTEIN MALE DISCOVERER 2 10 241 - -
Aip05g01061 691 PANTHER PROTEIN MALE DISCOVERER 2 270 689 - -
Aip05g01061 691 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Aip05g01061 691 Gene3D Phosphorylase Kinase; domain 1 365 473 - -
Aip05g01061 691 Gene3D Transferase(Phosphotransferase) domain 1 474 682 - -
Aip05g01061 691 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Aip05g01061 691 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 241 - -
Aip05g01061 691 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 270 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01061 Aip-Chr5 15175069 15178508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01061 9 666 Receptor kinase-like Gene Family AT2G01210 26.230 1.91e-51 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aip05g01061 PK_Tyr_Ser-Thr 6.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01061 - - ahf:112749652 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01061 05 15175069 15178508 Aip05g01061 05 15175069 15178508 ECH
Aip05g01061 05 15175069 15178508 Aip03g03235 03 105484463 105488752 PCT