Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01046 ATGACGCCATTGCCGGTGGAGCAGACGGGCGAATCAGGGGCGACGGAGTCACAGAGATCCATTCCGACGCCGTTTCTGACGAAGACGTACCAGCTGGTGGACGATCCGTCTGCTGATGACCTAATTTCATGGAACGAAGATGGCACCACCTTTATTGTTTGGCGACCAGCTGAATTCGCTCGAGATTTGCTTCCCAAGTATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTACGGATTTCGCAAGGTCGTACCTGACCGCTGGGAATTCGCTAATGAATGTTTCCGGCGAGGGGAGAAAGGTTTGCTTCGCGACATACAGAGGCGTAAAATATCGCCGGCAGCTGGTGACAATAACGTGGTGACGGTTGCCATGGCAGCACCGGGGAGAGTGGTGTCGCCTACGCCGACGAATTCCGGCGACGAACAGTGCACCGCACTACCAGTTGCACCAGTGGACCCGAGCTATTAG 486 0.5494 MTPLPVEQTGESGATESQRSIPTPFLTKTYQLVDDPSADDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANECFRRGEKGLLRDIQRRKISPAAGDNNVVTVAMAAPGRVVSPTPTNSGDEQCTALPVAPVDPSY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01046 161 Gene3D - 17 115 IPR036388 -
Aip05g01046 161 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Aip05g01046 161 MobiDBLite consensus disorder prediction 1 20 - -
Aip05g01046 161 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip05g01046 161 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 9 126 - -
Aip05g01046 161 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 126 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01046 Aip-Chr5 15062272 15062914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01046 16 117 HSF AT4G11660 91.176 5.79e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aip05g01046 HSF_DNA-bind 3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01046 K09419 - csin:114309234 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01046 05 15062272 15062914 Aip05g01046 05 15062272 15062914 ECH