Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01030 ATGGCGATTATGGAAATCAGAAATAAGAGGGTGGTGGAAGATGTTGCAATAATCGGAGGGTTGATCGGAGTCCAATTTATCTACGCAGGGAACGCTTTTCTGATGAGTTATGCTATGTCATTAGGCCTTAACTCTCTTACCATTGTTATTTTCACTTCCCTAGCTACCTTCCTTGTTCTCTTCCCCGTTGCCTTTTATTTTGAAAGGACTAAGTGGCCCAAGGAGTGCAAACTCAAGCTGATTATGCAACTCTTGTTTCTTTCATTTGGAGGACTAGCTTTCCAGTGTCTGTTTCTGAAAGGAATCAATCTAACTTCACCAGCAATGGGAACTGCAATGCCAAACCTTGCACCGGGTCTTATCTTCATCATGTCTTGGACTTTTGGGTTGGAGAGTGTAAACTTAAGGAACACACATAGCAAAGTAAAAATCTTAGGAACACTGCTATGTGTTTTTGGGGCTCTCACAATGAGCATAATGCAAACCATTTCTGCTCCTCCGGAAACCGGTTTTGAGGCTACAGTTCAATCATCATCGACGCCATTGCAGTTTGTCTTCGACAAGCACAAGATGATTGGCAGCCTCTATCTTGTCGCTGCAGTCTTCATACTGTCGAGCAGCGTAGTCCTGCAGGCTTTTGTTCTTGGAGATTTTGCGGCACCTATGTCCTTGGGTGCAATAACGTCCTTGTTAGGGGCCTTCATGACCGCAGTTTTTCAGTTACTTACAGAGCACCAAGTGAAAACTGATTGGCAAGTTCTGCGTTTTAAAGACCTAATTGGCTATTCTTTTCTGGCAGGTGTAGCGAGTGGAATATGTTTAAGCTTCAATGGTTGGGCACTTAAGAAGAAAGGACCAGTCTTGGTCTCCATGTTTAGCCCCATTGCTACAGTCTGCTCTGTCATTTTCTCCCTTGTTACCATGAGAGACACTATTAATTTTGGAAGCATTGCAGGTATGTTACTCATGTTCACTGGCCTGTACTTAGTTCTTTGGGCCAAAGACAAAGAAGGCAACGCAAGAGGAAATAATGGCAATGAGATTGAGAAGGCTTTTTTAAGTTGA 1065 0.4319 MAIMEIRNKRVVEDVAIIGGLIGVQFIYAGNAFLMSYAMSLGLNSLTIVIFTSLATFLVLFPVAFYFERTKWPKECKLKLIMQLLFLSFGGLAFQCLFLKGINLTSPAMGTAMPNLAPGLIFIMSWTFGLESVNLRNTHSKVKILGTLLCVFGALTMSIMQTISAPPETGFEATVQSSSTPLQFVFDKHKMIGSLYLVAAVFILSSSVVLQAFVLGDFAAPMSLGAITSLLGAFMTAVFQLLTEHQVKTDWQVLRFKDLIGYSFLAGVASGICLSFNGWALKKKGPVLVSMFSPIATVCSVIFSLVTMRDTINFGSIAGMLLMFTGLYLVLWAKDKEGNARGNNGNEIEKAFLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01030 354 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016021|GO:0022857
Aip05g01030 354 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Aip05g01030 354 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
Aip05g01030 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 336 - -
Aip05g01030 354 PANTHER WAT1-RELATED PROTEIN 15 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01030 Aip-Chr5 14874620 14877000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01030 3 338 Nodulin-like Gene Family AT5G47470 55.752 5.41e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01030 - - aprc:113870214 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01030 05 14874620 14877000 Aip01g01416 01 44129538 44136335 PCT