Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01028 ATGGCTTGTCTCTCGCTGCAACTGCTGCTTTTGTGTTTCACCACTCTCACAATTCATGCGACAAAGGTGACATGTGCAGAACCCTACCATCACCGTAGCACCCTTAGAACATTGTCTTCTTCTTCTTCTACCAAGTCCTCCTCCAATCATCGTCGGAACCACACTTGGGTGGGACCAACAGGTCAGCGCGTAATCACCGTTGACGTCAACGGCGGTGGACAGTTCCGGTCGGTGCAAGCTGCGGTGAATGCCGTTCCAGACAACAATAGAATGAACGTACTGATCCAAATCAGCCCGGGATCCTACATAGAGAAGGTTGTTGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGAGCGGGAAAAGAAGTGACGGTGATAGAATGGCATGATAGGGCCAGCGACCCTGGTCCCAACGGACAGCAACTGCGTACTTACAGAACTGCTTCTGTCACTGTTTTCGCCAACTATTTCTCTGCTCGCAATATCAGCTTCAAGAACACAGCGCCAGCACCAATGCCGGGGATGCATGGCTGGCAAGCGGCGGCGTTTCGAATATCCGGTGACAAAGCATACTTCTCAGGCTGTGGATTCTACGGAGCACAAGACACTCTTTGCGACGACGCTGGCAGGCATTACTTCAAGGACTGCTATATCGAGGGTTCAATTGATTTCATATTTGGGAATGGCAGATCCATGTACAAGGATTGCCAGCTACACTCAATAGCAACGAGATTTGGTTCCATAGCAGCCCATGATAGGAAAGAGGCAGAGGAGAAGACGGGCTTTGCATTCGTGAGATGCAGGGTGACGGGCACAGGCCCGCTCTATGTGGGCAGAGCCATGGGCCAGTACTCCAGAATTGTCTACTCTTACACTTACTTCGATGACATTGTTGCTCATGGCGGCTGGGATGATTGGGACCATGCCAACAATAAGAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGGCCAGGAGCAGAGGCAGTACGTGGGGTATCATGGGCCAAAGAGTTAGATTTCGAATCTGCCCACCCATTTCTCGTCAAGAGCTTTGTCAATGGCAGACACTGGATTGCACCTTCTGATGCCTAG 1101 0.5104 MACLSLQLLLLCFTTLTIHATKVTCAEPYHHRSTLRTLSSSSSTKSSSNHRRNHTWVGPTGQRVITVDVNGGGQFRSVQAAVNAVPDNNRMNVLIQISPGSYIEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMHGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHDRKEAEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWAKELDFESAHPFLVKSFVNGRHWIAPSDA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01028 366 Gene3D - 60 365 IPR012334 -
Aip05g01028 366 MobiDBLite consensus disorder prediction 36 57 - -
Aip05g01028 366 Pfam Pectinesterase 65 357 IPR000070 GO:0030599|GO:0042545
Aip05g01028 366 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Aip05g01028 366 SUPERFAMILY Pectin lyase-like 61 363 IPR011050 -
Aip05g01028 366 PANTHER PECTINESTERASE 68-RELATED 31 365 - -
Aip05g01028 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01028 Aip-Chr5 14819524 14823355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01028 32 366 Carbohydrate Esterase AT5G47500 76.119 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01028 - - cam:101501763 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01028 05 14819524 14823355 Aip05g01028 05 14819524 14823355 ECH