Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01027 ATGCTTCTTATATGGGGCCGGGGCCGGGGTCGGGGCCGGTCGTCATCGCTGATATCTTCGTCACGGTATCGAACTCGGACGCCGCCTCCGATTCGCGTTTACGCTGCGGTGTTCATCTCTAGCAGAAGAGGCAGCAAgtcgcggtgggacgttgttggtgtcgtattgttgcctcgagcatcgcagtcagcttcgtcgtcaccgttaacctccgacgtgcaacccgatctgATGGGAACCACCAACAAGATGTATGACAACGATAATGCTTGTCAAGAGAATGCCTACACTAGAAATGGATCAAAGAATGTGGATGAGGATACGACTCACAATACTACCGAGAGTGAATTTTTCTACCAAGACATGGGAGAATTTGGTGACGTTGAAGGGATAGATGTGGAAGACATAATAAAGAAAGTATTTAGGAGTGATGAGGACACGTATAAGTTCTATAAGAAGTTTGGAAAATATCACGGCTTTGGAGTTAGAAAGGGGGATTCTTGGAAGGATGAGGATGGTATTGTCACAAGGCAGAGATTCTTCTGCAACAGGCAAGGTTTGAGAGATGCAAAGCACTATAATCGGTTAGATAGGATGAGGGTTCAAAAACCAGAAACGAGGACTAATTGCGAGGCAAAGTTCTCCATATACCTTGACAAGAGTGCTTCTCTATGGCGAGTAAGGAAGATTAAAAACAAGCACAATAATGACTTGATCCCTAGTTGCATGGTGCATTTGATTGCGAAGTACCGGTCACTCACGAATGCCGCCAAAGCTCAGATAGATGGGTTGAACGAGTATGGAATTTCGACAGCGAAGAGTGTACGATATATGGCTGGGATGGCTGGAGGATACTCGTTGGTTGGCTTCTTAAAGAAGGACGCCTATAATCACATTGATAAAAGAAGGCATGTAACGATTGCGGAAGGCGATGCAGACGCTGCGCTTGCATATTTAGAAGATAAGACAGAATCGGATCCGATGGCCATTGCGCGGTATAGTTTGACCGATGATGGAATGCTAGGCAATATGTTTTGGACCGATGGGGGCAGCCGAGTCGATTACCAGTACTTCGGGGATGTTCTTGCGTTCGATGGACATACAAGAAGAACAAGTATAGGCGGCCATTGGTAA 1134 0.4198 MLLIWGRGRGRGRSSSLISSSRYRTRTPPPIRVYAAVFISSRRGSKSRWDVVGVVLLPRASQSASSSPLTSDVQPDLMGTTNKMYDNDNACQENAYTRNGSKNVDEDTTHNTTESEFFYQDMGEFGDVEGIDVEDIIKKVFRSDEDTYKFYKKFGKYHGFGVRKGDSWKDEDGIVTRQRFFCNRQGLRDAKHYNRLDRMRVQKPETRTNCEAKFSIYLDKSASLWRVRKIKNKHNNDLIPSCMVHLIAKYRSLTNAAKAQIDGLNEYGISTAKSVRYMAGMAGGYSLVGFLKKDAYNHIDKRRHVTIAEGDADAALAYLEDKTESDPMAIARYSLTDDGMLGNMFWTDGGSRVDYQYFGDVLAFDGHTRRTSIGGHW 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01027 377 Pfam FAR1 DNA-binding domain 149 239 IPR004330 -
Aip05g01027 377 PANTHER OS03G0181600 PROTEIN 139 367 - -
Aip05g01027 377 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 139 367 IPR031052 GO:0006355
Aip05g01027 377 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01027 Aip-Chr5 14808255 14811066 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01027 FAR1 3.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01027 - - aip:107615767 366.696