Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01025 ATGGGACCGGGGCCAGGACCGGTCGTCATTGCTGATATCTTCGTCACGGTATCGAACTCGGATGCTGCCTCCGATACGCGTGTTCGATGCGGTATGGGAACCACCAACAAGATGTGTGACAACGATGATGCTTGTCAAGAGAATGCCTACACTAGAAATGGATCAAAGAATGTGGATGAGGATACGACTCACAATACTACCGAGAGTGAATTTTTCTACCGAGACATGGGAGAATTTGGTGATGTTGAAGGGATAGATGTGGAAGACATAATTAAGAAGGTATTTAGGAGTGATGAGGACGCGTATGAGTTCTATAAGAAGTTTGGAAAATATCACGGCTTTGGAGTTAGGAAGGGGGATTCCTGGAAGGATAAGGATGGTATTGTCACAAGGCGGAGGTTCTTCTGCAACAGGCAAGGTTTGAGAGATGCAAAGCACTATAATCGGTTAGATAGGATGAGGGTTCATAAACTAGAAACGAGGACTAATTGCGAGGCGAAGTTCTCCATATACCTTGACAAGAGTGCTTTTCTGTGGCGAGTAAGGAAGATTGAAAACAAGCACAATCATGACTTGACCCCTAGTTGCATGGTGCATTTGATTGCGAAGTACCGATCACTCACGGATGCCGCCAAAGCTCAGATAGATGGGTTGAACGACCGAGTCGATTACCAGTACTTCGGGGATGTCCTTGCATTCGATGCGACATACAAGAAGAACAAGTATAGGCGGCCATTGGTAATCTTCTCAGGGGCCAACAACCACAAGCAGACCACCATTTTCGGTTTTTGTTTACTAATGGATGAGACATTTGATTCGTATAAGTGGATATTGCAGAACATGGAGGTGATGTGCATGAAGGAGCCATCAGTGGTTGTTACAGATGGGCATGAGGCGATGCGTAAAGCCATAACTTTAGTATTCCCGAAGGCAACCTACCGCCTATGTGCATGGCATTTTCAGAAAAATATTATGGCCAACGTGAAGGAGCCGTCACTCCGATTACGATTTAATCGATGGTTATATGCGGACATCGACATTCGTGAATTCCTGACTGAGTGGGACCTAGCGATTGAAGAGTTCAAACTTCAAGATAGCCTATGGGCGAGGCAGGTGTTCGATAAGAAGGAAATGTGGGTGAATGCATATTTGAGGAATAAATTTTGCGCCGAGTTTAGGACCACATCTCAATGCGAAGGTATAAACGCTGTAGTCAAGAATTTCCTTCAATTGAAGCGTACTATTCTTGAACTTGTGCAGAACCTGAAGCTAATGGTACGTGATTATCGGAATAACGAGCTTCTAGCCCAGTTCCAAAAGAAGTCTTTGCTAACAGCCACCCATACACAATAA 1353 0.4479 MGPGPGPVVIADIFVTVSNSDAASDTRVRCGMGTTNKMCDNDDACQENAYTRNGSKNVDEDTTHNTTESEFFYRDMGEFGDVEGIDVEDIIKKVFRSDEDAYEFYKKFGKYHGFGVRKGDSWKDKDGIVTRRRFFCNRQGLRDAKHYNRLDRMRVHKLETRTNCEAKFSIYLDKSAFLWRVRKIENKHNHDLTPSCMVHLIAKYRSLTDAAKAQIDGLNDRVDYQYFGDVLAFDATYKKNKYRRPLVIFSGANNHKQTTIFGFCLLMDETFDSYKWILQNMEVMCMKEPSVVVTDGHEAMRKAITLVFPKATYRLCAWHFQKNIMANVKEPSLRLRFNRWLYADIDIREFLTEWDLAIEEFKLQDSLWARQVFDKKEMWVNAYLRNKFCAEFRTTSQCEGINAVVKNFLQLKRTILELVQNLKLMVRDYRNNELLAQFQKKSLLTATHTQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01025 450 Pfam MULE transposase domain 230 323 IPR018289 -
Aip05g01025 450 Pfam FAR1 DNA-binding domain 103 193 IPR004330 -
Aip05g01025 450 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 94 216 IPR031052 GO:0006355
Aip05g01025 450 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 220 441 IPR031052 GO:0006355
Aip05g01025 450 PANTHER OS03G0181600 PROTEIN 94 216 - -
Aip05g01025 450 PANTHER OS03G0181600 PROTEIN 220 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01025 Aip-Chr5 14790686 14794076 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01025 MULE 6.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01025 - - ahf:112747981 455.677