Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01016 ATGAACGCATTTTCCCATGTTCCTCCTGGGTTTCGGTTCCATCCGACGGATGAAGAACTTGTTGATTACTACCTAAGGAAAAAGATAGCTTCGAAAAGGATTGATCTGGATGTGATAAAAGATGTGGATCTCTATAAGATTGAGCCATGGGATCTTCAAGAAATATGCAAAATAGGAAGCGAGGATGAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTACCCAACAGGGACTCGCACCAATAGAGCTACAAAGGCAGGATTCTGGAAAGCCACGGGAAGAGACAAAGCCATATACTCAAGCTCAAGCCATTGCCTGGTTGGTATGAGAAAGACTCTTGTGTTCTACAAAGGACGAGCTCCCAATGGCCTCAAATCAAACTGGATCATGCACGAGTATCGTCTTGACTCCAATCAGGAAGATGGCTGGGTTGTGTGCAGAGTCTTCAAGAAACGGATGCCCACGCTACGCAACGTGGTAGACTATGATGATCAACTTCCCTTCATGCAAGGATCTCCATCCACTCACTATCCCTGCAAGCACGACCTTCATCAATTCCAATACAACACCCATGATGCTTTTCTCCAACTTCCACACCTTGAGAGCCCTAATCAAGTTTTGAGTTCACCCTATGCCTACGCCGAAAACAACAACAACAATAATGGAACTTTGCAGTCCTATTCATCTGAACGCATTCAGCAACAACTTCACTTGCTTTATGGTAGCAATATTGAGCAAGCAGTAGTGGTGGACCAAGTCACGGATTGGAGAGTGCTTGACAAATTTGTTGCTTCTCAACTCATGAGTCAAGATCAAGATCAGGCTTCCAAGGAAACCTGCAGCGTGGCTGATGAACAACATGTTGCTACTACTGTGCTTCCAAATGGATCCACCAAGCAGGATGACTATGTTTCAACGTCTGCCTCCAGTAACTGCGATATTCACCTGTGGAATTGA 963 0.4444 MNAFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQEICKIGSEDENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSSSSHCLVGMRKTLVFYKGRAPNGLKSNWIMHEYRLDSNQEDGWVVCRVFKKRMPTLRNVVDYDDQLPFMQGSPSTHYPCKHDLHQFQYNTHDAFLQLPHLESPNQVLSSPYAYAENNNNNNGTLQSYSSERIQQQLHLLYGSNIEQAVVVDQVTDWRVLDKFVASQLMSQDQDQASKETCSVADEQHVATTVLPNGSTKQDDYVSTSASSNCDIHLWN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01016 320 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Aip05g01016 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 288 - -
Aip05g01016 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 288 - -
Aip05g01016 320 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
Aip05g01016 320 Gene3D NAC domain 16 156 IPR036093 GO:0003677|GO:0006355
Aip05g01016 320 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01016 Aip-Chr5 14558307 14559343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01016 1 319 NAC Transcription Factor Family AT1G12260 52.809 6.92e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g01016 NAM 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01016 - - ahf:112800892 636.721